Tripterygium wilfordii (thunder duke vine): 119982528
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Entry
119982528 CDS
T07256
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119982528
03036 Chromosome and associated proteins [BR:
twl03036
]
119982528
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119982528
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119982528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
xRRM
Motif
Other DBs
NCBI-GeneID:
119982528
NCBI-ProteinID:
XP_038681896
LinkDB
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Position
17:complement(5844140..5856563)
Genome browser
AA seq
851 aa
AA seq
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MEEQTLDDKSKEKSEFKVEESIKGDDLMSEASPQSTKSKEASPAVSSDSDDMLSDSDEDE
DEEEGQQKLQLQTLEAELSSNPSNYDTHVQYIKLLRKMAELEKLRQAREAMSALFPLTPE
MWQEWAKDEASLSIGHDAVPVIEKLFDRGVLDYLSVPLWCDYIQFIKEYDPSVRERTPDG
ISKARNLFERAINAAGLHVAEGSKIWEAYREYEQAILHTIDGSDSEVKEKQVQRIQNIFH
RQLSVPLSDLTSTLLAYKSWETEQGNILDVGSNNVDGISSKLALSYQKALEMYNARAYFE
EQITAHDTADLGKFQHFMTYIKFEQSFGDPSRVQVLYERAISSFPVSSDLWLDYTRYLDG
TLKVGKVLRDVYSRASRNCPWVGELWIRYLLSMERGRASEEEIAAVFEKSLQCTFSTLDE
YLDLFFTRIDGLRRRISFADEADSLLDFSVIRETFQRASDYFSPHLKNTDGFLRLHAYWA
RLELKLRKDLTAARGIWESFLKICGFMLEGWLGYIAMEIELGHINEARSIYKRCYSKRFP
GTGSEDIWHSWLRFEREFGTLEDLDHAAQKVMPRLEELRLVRLQQESKMMAGSTDQGENH
VKKSAREKRKPASNVANEQSPAKRQKHTTQAQEKMLEKDKGEVQKSVEESKVEDVNGVDA
KVGDSPKRPIENSEPQRRKVYTDQCTAFISNISLQANEEHIRQFFSDVGGVVSIRILRDK
LTRKSRGLAYVDFSDDEHLAAAVARNKQTLLGKKLSIARSNPNQKRKQSVGHNAPKEQAR
ITKPNVPDGGSASKESVTNKQDSNIQRKENKLFVPRNVRPLGWTSKNPRSEEESDEKPKS
NDEFRKILFKK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaaaccctagatgacaagtcgaaagaaaaatcagagttcaaggttgaagag
agcatcaaaggggacgacctcatgtcggaagcgagtcctcaaagtacaaaatcaaaagag
gcctcccctgcagtgtcttcggactcggatgacatgctctccgactccgatgaggatgag
gacgaggaagaggggcaacaaaagcttcagcttcaaaccttagaggccgagctatcaagc
aatccctccaactacgatactcacgttcaatacataaagcttttgaggaagatggcagag
ctggagaagctaaggcaggcaagggaagcaatgagtgcactgtttccattgaccccagaa
atgtggcaggaatgggctaaagatgaggcttcactttccatcggacatgatgcagttcca
gtgattgagaagctttttgaccgaggggtgcttgattacttgtctgttcctctctggtgt
gactacatccaatttattaaagaatatgatccctctgtgcgtgaacgtacaccagatggt
atttcgaaggcaagaaatctatttgagcgtgctattaatgctgctggtttgcatgttgct
gaaggaagtaagatatgggaagcatatagggaatatgaacaagctatacttcataccatt
gatgggtctgattctgaggtgaaagaaaagcaggtccagcgcattcaaaatattttccac
cggcaattgtctgttcccctttccgacttgacctcaactcttctagcctataagtcttgg
gagacagaacaagggaatatacttgatgttggatccaacaatgtggatgggatctcttct
aaattagctttgtcttaccagaaggccctggagatgtataatgctcgtgcttattttgaa
gaacagattactgcacatgataccgctgacttgggaaaatttcagcacttcatgacgtac
ataaaatttgagcagtcttttggagatccatccagggtgcaagttctttatgaacgtgca
atttccagttttcctgtgtcaagtgatctgtggcttgattatactcgttatctggatgga
acgttgaaggtcggcaaagttttgagagatgtttattccagggcctcaagaaattgtcca
tgggttggagagctttggatacggtatttactttccatggaaagaggccgtgcttcagag
gaggagattgctgctgtttttgagaaatcgctacaatgtaccttttcaacccttgatgag
tacctagatttgttttttacacgaatagatggcttgcggagaagaatttcatttgctgat
gaagcagacagtctcttggatttttcagtaataagagaaaccttccagcgtgcatctgat
tacttctcaccacacctgaagaacacggatggctttttgcgattgcatgcttattgggct
cgtttagagctaaaattgagaaaagatctaactgcagctcgtggaatttgggagagcttc
cttaagatatgtggttttatgctggaaggctggctaggttatattgctatggaaatagaa
ttgggtcacataaatgaagctcgatccatttataaaagatgctacagtaaacgatttcct
ggaacaggctccgaggacatttggcattcatggttgcgctttgagagggaatttgggaca
ctggaagatttggatcatgctgcacaaaaggttatgccacgtctggaagaactgcggctt
gttaggctacagcaggaatccaaaatgatggctggatcaactgatcagggagagaatcat
gtgaagaaaagtgcccgtgaaaagaggaaaccagcttctaatgttgctaatgaacagtcc
ccagcaaagcgccaaaaacatacgactcaagcccaagaaaagatgcttgaaaaagataaa
ggtgaagtgcaaaagtcagttgaggaatcaaaagtggaagacgtcaatggtgtggatgcg
aaggtgggtgatagccctaagcgaccaattgaaaactctgaacctcaaagaagaaaagtg
tatacggaccaatgtactgcatttatatcaaatattagccttcaggcgaatgaagagcat
atacgtcaatttttcagtgatgtaggtggggttgtctctataaggatactccgtgataaa
ttgacaagaaaatcaaggggactggcatacgtggacttctccgatgatgaacaccttgct
gctgcagtagcaaggaacaagcaaacgctacttgggaagaagctgagcatagcacgttca
aatccaaatcagaagagaaagcaatctgttggccataatgccccgaaggaacaggctcgc
attaccaagcccaatgttcctgatgggggatctgcatctaaagaatctgtgactaataag
caggatagcaacatccagcgcaaggaaaacaaactatttgtgccaagaaacgttaggcca
cttggttggacatcaaaaaaccccagaagtgaggaagagagtgatgagaagccaaaatca
aatgatgagttccggaagattttgtttaagaagtga
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