Tripterygium wilfordii (thunder duke vine): 119982787
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Entry
119982787 CDS
T07256
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119982787
Membrane trafficking [BR:
twl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119982787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
119982787
NCBI-ProteinID:
XP_038682273
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Position
17:2835742..2851461
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AA seq
1324 aa
AA seq
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MASSTLPDMDDEMDEDFFDRLIKDDDDYGNVCVASAPSIVKEDDSDDAKVISNLTISETG
PSGIDFDVKEGFKVNDEQGCDSADVLASVDIHENNVVNKEQNSAANSDVNDASEVSLRQD
VGLESKMSGESSTYSGTCVKEVHWASFNSDIHSHSGDKVKSFSDFFGEVGDDTDDPFANV
EAMDNSGSELNTNNEVTGKFVNDFGSSSCGQYSVGNEYLGAESEQNAGGHDLTGSQDWEN
HYPGWKYDPITGQWHQLDGHNANMPGNANGYVQESIDVSAQSGNVVSEQSASAYYSHHTS
QSVTGSVGTGLFTTDGVSNWKQISQGNEQYPAHMVFDPQYPGWYYDMIAQEWRSSESYAP
VVNQSTSSGYNQPYQNKSFENSESQMHHSREYISNLAVTSSEEQGLKNQYGATGILDSSN
EQTGSEIYGSTSSQKQANQNFDNGNGNAGFHSFNSSEQFPQHHNQTKVEPSQNMQFSPAY
FDSQKAIAFSQQPFLSDTQFSYVPSEGRSSVGRPPHALVTFGFGGKLIVTKRGSSFHSNS
PYENKDSGGVFNVLNLTEVVLDKADASNFELGYHDYFVALCQQPLPGPLVGGNVGNKELN
QWIDDRISNCDMNYRNGEVLRLLFSLLKISCQYYGKLRSPLGTDQGSKENDCPESAVAKL
FASAKRSGMQSGEYGAFMHCVQNLPSEAEIQATAVEVQKLLISGRKKEALECAQEGQLWG
PALVIATDLGDQFYGDTVKNMALKQFVAGSPLQTLCLLMAGNPADLFSNVATRVGLHGYL
GAPQQALQIGAHGLLDAWEDNLSMITANRTKDDELSIVRLGDCLWKGRGEVTAAHMCYLV
AEANFELYSDTARLCLLGADHLKFPRTYAFPEAIQRTELYEYSKVLGNSQFLLHSFQPYK
LIYAHMLAEVGKVAESLKYCQAILKSLKTGREPEVETWRQLASALEERLRIHQQGGYSTN
LAPKKLVGKLLTFFDSSPSRVVDSLPPPVPSTSHGSVKRNEYAQQPEVSKVSNSQSTMDV
SSVMPSASMGPISERTGDSTRATISNRSILEPDFGRTPGKADSSKGANSSDTQLKASAPV
GSSRFGRFGSQIFQKTVGLVLRSQPHQQAKLGEKNRFYYDEKLKRWVEEGAEPPAEEVAL
PPPPSTTAFQGTVPYDNIKDTPKVESHSNGVPEYFSPISSEKGSGIPPIPPSSNQFSARG
RSGVRSRYVDTFNKGGVTPATSFQSPSFPAKISQASNPKFFIPTPVASSEDIVQTTAGST
PEVIADNENPPIYTQEDSLSSPPTSTPTPTSPPSISMHRFPSMDNVVQKKSTGMLDDNNS
LPHS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctactctaccggacatggatgacgagatggatgaggatttttttgataga
ttgattaaagatgatgatgattatgggaatgtttgtgttgcatccgcgcctagtattgtc
aaagaagatgattcagatgatgctaaggtgatttctaatttaacgattagtgaaaccggc
ccttctggaatagactttgatgttaaagaaggttttaaggtcaatgatgaacagggttgt
gatagtgcggacgtcttggcatctgtggatattcatgagaacaatgtagttaataaagag
cagaattcagctgcaaacagtgatgtaaatgacgctagtgaggtcagcttaaggcaggac
gttggattggaaagtaaaatgtctggagaaagtagtacgtattcaggaacatgtgtcaaa
gaagtccattgggcttccttcaactcggatatacatagtcatagtggtgataaagtcaag
tcattttcagatttttttggtgaggtgggggatgatacagatgatccatttgcaaacgtt
gaagccatggataattccgggtcagagttgaatacaaacaatgaggtcacgggaaagttt
gttaatgattttgggtcctcaagttgtggacaatactcggttggcaatgaataccttggt
gcagaatctgaacagaatgcgggtggacatgatttgactggcagccaggattgggaaaat
cattatccaggatggaaatacgacccaataactgggcagtggcatcagttggatggacac
aatgcaaatatgcctggaaatgcaaatggttatgttcaggagagtattgatgtgtctgcc
caatcaggtaatgttgtttcagagcaaagtgcaagtgcttattattcacaccatacatcc
caatctgttactggaagtgtggggactggcttgtttaccactgatggtgtctctaactgg
aaacagatttcacaaggaaatgagcagtacccagctcatatggtgtttgatccccaatac
cctgggtggtactatgacatgattgcacaagaatggagatcatcggaatcttatgctcca
gttgtgaatcagtcaacttctagtggttataatcaaccttatcaaaataagagctttgaa
aacagcgagtcacaaatgcatcacagtcgggaatatatctcaaatttggctgtcacatca
agtgaagaacagggattgaaaaatcagtatggtgcaacgggcattctagattcttctaat
gaacaaactggaagtgaaatttatggatcaacttcttcccaaaaacaggcaaaccagaat
tttgacaacggcaatggaaatgcagggtttcatagctttaattctagtgaacagtttcct
cagcatcataatcagacaaaagtggaaccaagccagaatatgcaattctctcctgcttat
tttgatagtcagaaagcaatagctttctcacagcagcccttcctaagtgacactcagttt
tcttatgtaccaagtgaaggaaggtcgtctgtaggacgccctccacatgctctagttact
tttgggtttggtggaaaactcatagtcacaaaacgtggcagttcctttcactcaaactca
ccatacgaaaacaaggactctggaggtgtgttcaatgttctcaacttaacagaagttgtc
ctggacaaagctgatgcttcaaactttgaattaggttatcatgattacttcgttgctctg
tgccagcaacctttacctggccctttggttggtgggaatgttggaaataaggagttgaac
cagtggattgatgacaggatatcaaattgtgacatgaactacagaaatggggaagtcttg
agattacttttctcattgctgaaaatatcatgtcaatactatgggaaacttcgatcaccc
ttggggaccgaccaaggatcaaaggaaaatgattgtccagagtcagctgtagctaagctt
tttgcatctgctaaaagaagtggtatgcaatcgggtgagtatggtgcattcatgcactgc
gtacagaacttgccgtctgaggcagagattcaggctactgctgttgaggtacaaaaactt
ctcatctctggtcgaaagaaagaagctctagaatgtgcacaagaaggtcaattgtggggg
ccagcacttgtgattgcaaccgacctcggtgatcagttttatggtgatactgttaagaac
atggcacttaagcagtttgttgcaggatcaccattgcagacattgtgccttctaatggca
gggaatcctgcagacctattttccaatgtcgcaactagagttggtctccatggttatttg
ggtgcacctcaacaagctttacagattggggctcatggtctgttagatgcatgggaagat
aatttatccatgatcactgcaaacagaacaaaagatgatgagctttcgattgtccgtctc
ggagattgcctgtggaaggggaggggtgaggtcactgctgcgcacatgtgttatctagtt
gcagaagccaactttgagctgtactcagatactgccagactgtgtcttcttggtgcagat
catttgaagtttccacgaacatatgcttttcctgaggcaattcagaggacggaattatat
gagtactcaaaggtgcttgggaattcgcagtttctccttcattcctttcagccatataag
cttatttatgcccacatgcttgctgaagttggaaaagtggcagaatctctgaagtactgt
caagcaatcctgaagtctctaaaaactggtagagaacctgaagtggaaacatggaggcaa
ttggcgtccgctcttgaggagcggttgagaatccatcaacagggtggttatagtaccaat
ttggctccaaaaaaactcgtgggcaagttgctcaccttctttgatagttctccaagtcga
gtagtggacagcctacctccacctgtgccatcaacatcacatggcagtgttaaacgaaat
gaatatgctcagcaaccagaggtgtcaaaagtgtccaacagtcaatcaacaatggatgtg
tcatcagtaatgccgtcagcatcaatgggacccataagtgaacggactggagattctact
cgagctacaatttctaataggagcattttagagccagattttggtagaacccctggaaag
gctgattcatccaaaggtgcaaactcttctgatacccaactaaaagcatctgcgccggtt
ggatcatctcgttttggtcggtttggttcacagatattccaaaagacggtgggtttggtc
ttaaggtctcaaccacaccagcaggctaaattgggtgagaagaacagattctattacgat
gaaaagctaaagcggtgggttgaggaaggtgccgaacctccagcagaggaagtggctctg
ccaccaccaccatcaacaactgctttccagggtaccgtgccatatgacaacataaaagac
acaccaaaagttgaaagccactcaaatggcgtgccagaatatttcagtccaatctcctct
gaaaagggatcaggaatcccacccattccaccaagttcaaatcaattctctgctcgtggg
cgttcgggtgttcgctcaaggtatgttgacacattcaacaagggaggtgtaaccccagca
acctcatttcagtcgccttcttttcctgcgaagatatctcaggcttccaatcccaagttt
ttcattcccaccccagtggcctcaagtgaagatatagttcagacaactgcggggagcaca
ccggaagtcatagcagacaatgaaaatcctcctatatatacgcaagaagattcgctctca
tctccaccaacatctacaccaacacccacatcaccgccatcaatctctatgcatcgcttt
cctagcatggataatgtcgtacaaaagaaatcaaccggcatgctagatgacaataactca
ctgcctcattcctga
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