Tripterygium wilfordii (thunder duke vine): 119982803
Help
Entry
119982803 CDS
T07256
Name
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119982803
03015 mRNA surveillance pathway
119982803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119982803
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119982803
mRNA cycle factors
P-body specific factors
119982803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
119982803
NCBI-ProteinID:
XP_038682301
LinkDB
All DBs
Position
17:9279994..9291543
Genome browser
AA seq
512 aa
AA seq
DB search
MKGGSDRTKVVLRHLPPAISEAMLMGQIDSVVAGRYNWVSFRPGKNSLKRQTYSRAYIDF
KRPEDVLDFAEFFNGHVFVNEKGTQFKTIIEYAPSQRVPQQWSKKDGREGTIQKDPEYLE
FLEFIAKPVENLPSAEIQLERREAERAGTAKDPPIITPLMDFVRQKRAAKIGSRQQRLSS
NGKLRSRSVEISGGSSSSASSKQGSEKKRGSKTMYVPRDSTKSISGKDKFTYMLVSRQVD
QRVSAAEGEGLEDESGVSGSTDSDKKKVLLLKGKEREILHHQNMTTPIKNLYGPSAFKQN
QRHEAAGKTVRSILVNKDSRLSQSGGIQSEQKIHTSVLEKDRRPPRSPTIQFVSKDMNGA
SDDKLVGDNLHGLHGEKEKRARNKDRPERVVWTPLRRSDGSDTSDESLSSSASQPSHTLS
DSLEGRHEDLGINAASARRGEVKVFGSGRSSHSSSDNNGFTKHVVRRVTSHFAKDTDGSL
VLSEGKSSRRSSTTSYGSHEKQVWVQKSGSGS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgggtcggatcggaccaaggtggtgttgcgtcacctgccaccggcgatatct
gaagctatgctcatggggcagattgattctgtcgtcgcgggacgctacaactgggtctcg
tttcgcccagggaagaacagtctgaagcgtcaaacttattcaagagcatatattgacttc
aaaaggccagaggatgttttggactttgctgagttctttaacggtcatgtttttgttaac
gagaaagggactcagttcaaaactattattgagtatgccccttcgcagcgagttccacag
cagtggtcgaagaaagatggtcgtgaagggacaatacaaaaggatcctgagtatctggag
tttcttgaatttattgcaaagcctgttgagaatcttccgagtgcagagatacaattggag
aggagagaagcagaacgagctggcactgcaaaagaccctcctataataactcctctaatg
gactttgttcgacagaaaagagctgctaagatcggatctcggcagcagagattatcatct
aatgggaaactgaggagcaggagtgttgaaatatcaggtggaagttctagctcagcttca
tccaagcagggttctgaaaagaaaagggggtccaagacaatgtatgtaccgagggacagt
acgaaaagtatcagtggcaaagacaaatttacttacatgctagtttcaaggcaagttgat
cagcgggtttctgcagctgaaggggaaggactcgaagatgaaagtggagtttctggaagt
accgactcggataagaagaaagtcctgctgctgaaagggaaagagagagaaattttacat
catcagaatatgacaactccaattaaaaatttatatggcccgagtgcatttaagcaaaac
caacgacatgaagctgctggaaagactgtaagaagcatacttgttaacaaagactcccgc
ctaagtcaatctggtgggattcagtcagagcagaaaatccatacttctgttttggaaaag
gatagacgtcctcctcggtctccaactatacaatttgtgtcaaaggatatgaatggggct
tcagatgacaagttggttggggataacttgcatggtcttcacggtgagaaggagaagcgt
gcaagaaataaggatagacctgaacgtgtagtatggactcctcttcgtcgatctgatgga
tcagacacgagtgatgagtcattatcatcatctgcttctcaaccgtcacatacactgtca
gattctttggaaggaagacacgaagatctcggaattaacgcagcaagtgccaggagaggg
gaagttaaggtctttggaagtggacgtagcagtcattcttcttcagataataatggattc
actaaacatgttgttcgtcgtgtaacttcgcattttgcaaaggacaccgatggctcatta
gtacttagtgagggaaagtcttcaagaagaagcagtactactagctatggttcccatgag
aaacaagtttgggttcaaaagtcaggttctggttcgtag
DBGET
integrated database retrieval system
