KEGG   Tripterygium wilfordii (thunder duke vine): 119983293
Entry
119983293         CDS       T07256                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:twl03041]
    119983293
Spliceosome [BR:twl03041]
 Complex B
  Other components
   Complex B specific factors
    119983293
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 LisH_TPL Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_NWD2_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_VPS8 VPS8_N Beta-prop_DCAF12 Beta-prop_LRRK2 PROPPIN DUF7165 Beta-prop_NOL10_N Beta-prop_IFT122_2nd zf_topless WD_LRWD1 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 119983293
NCBI-ProteinID: XP_038682882
LinkDB
Position
18:complement(1277253..1286962)
AA seq 512 aa
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNILEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEHL
LVKTYFDPHEVYHESTKEKRRAQIAQAIATEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVDDMYPTNLAHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEVW
DYISGKLKKDLQYQADETFMMHDDAILCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRR
LERAHSQGVTSLAFSRDGSQLLSASFDTTARIHGLKSGKVLKEFRGHSSYVNNAIFTSDG
GRVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHLFPKNTEHIVVCNRTSS
IYIMTLQGQVVKSFSSGKREGGDFAAACVSPKGEWIYCVGEDRNLYCFSYQSGKLEHLMK
VHEKDVIGINHHPHRNLLATYGADSTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgaccttagaaattgaggctcgggatgtgataaagattgtgctgcaattttgcaaggag
aactctctgcagcagactttccagaccttacagaatgagtgccaggtctcactgaatact
gtggatagcattgagacatttgtggctgacatcaacagtggaaggtgggatgcgatactg
ccccaagtggctcagctcaagcttcccaggaacatattagaggatttgtatgagcagatt
gtgttagaaatgattgaacttcgtgagttggacacagcacgagcaattttaaggcaaact
caggtgatgggtgtcatgaagcaggagcaacctgagcgatacttgcgactagagcatctc
ctagttaaaacttactttgatccacatgaggtttaccatgaatcaacaaaagagaaacgt
cgtgcacaaattgcccaagctattgctactgaagttagtgttgtgccaccttctcgttta
atggctctgattggtcaagctcttaagtggcagcagcaccaggggttgcttccccctgga
acccagtttgacttatttagaggaacagctgctatgaaacaagatgtagatgacatgtat
ccaacaaatcttgctcacacgattaagtttgggacaaaaagtcatgcagaatgtgctcga
ttctcgccagatgggcagtttctcgtgtcttgttctgttgatggatttattgaggtctgg
gattacattagtggaaagctgaaaaaggatctacagtaccaggcagatgaaacattcatg
atgcatgatgatgccatcctctgtgttgattttagcagagattcagagatgcttgcatct
gggtcacaagatgggaagatcaaagtttggcgtataaggactggtcaatgcttgcgtcgt
cttgaacgagcacattctcagggtgtaacaagtcttgccttctctcgagatggaagccag
ttacttagtgcatcctttgacaccacagcaagaatccatggcttaaagtctgggaaggtg
ttgaaagaattccgtggccattcctcatatgtcaataatgccatctttacaagtgatgga
ggtcgtgttattactgcttccagtgattgtactgtcaaggtgtgggacgtgaagactact
gactgcctgcatacgtttaagccgccacctcctctgaggggaggtgatgcttcggtgaac
tctgttcatcttttccccaagaacacagaacatattgttgtttgtaataggacttcatcg
atatacatcatgacacttcaagggcaggttgttaagagcttctcatctggtaagagagaa
ggtggagattttgctgcagcttgtgtatcaccaaaaggagaatggatctactgtgttggt
gaagacaggaatttgtactgcttcagctaccaatcgggtaaactagagcatctaatgaag
gtccatgaaaaggatgtaattggcatcaatcaccatccccatagaaatctccttgctact
tacggtgctgatagcacgatgaaactatggaagccttga

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