Tripterygium wilfordii (thunder duke vine): 119983580
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Entry
119983580 CDS
T07256
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119983580
Transcription machinery [BR:
twl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
119983580
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Motif
Other DBs
NCBI-GeneID:
119983580
NCBI-ProteinID:
XP_038683184
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Position
18:12823559..12827845
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AA seq
514 aa
AA seq
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MGVVTVSSSAARAPLGLSTKVSTDRSTLKRPSVVAFKADKSNNTILVVPNDQIPLHIETT
RENQKKVGRASKPTKRVKSISANIFSPSSREVDYNEAAAKLESIYKLSPTVETSDLEHVD
GLKRRGQRRKKSGEDDKAGSKTSKIVVRSRKRKAKRLDLDKRIALRNRKEEELVDAITSV
RKRKDGKDEHEKIEQLVREYSGATDLGSLDWKRMKIPPVLPSTEHVWLFKLMQPLKALFK
VKEELGTTFGREPTDGELAEATNISVVQIRKQIEVGQAARNKLIKHNLRLVLFVMNKYFQ
DFANGPKFQDLCQAGVKGLITAIDRFQPRRNLRLSTYGFFWIRHAIVRSMTLTSFRRVSF
GLQSVRLEIQRAKLELLIELQREPTEEEIIKKVGISPERYQEVMRASKPVLSLHSRHAIT
QDEFINGITDIEGDNQRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLNISREMVRKYEVKALMKLKHPARVDHLRQYIV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagctgcaagggcaccactaggattgagcaccaaa
gtttcaactgatcgctccacattgaaaagaccttcagttgttgcattcaaagctgataaa
tccaataacaccatcctggttgtgccaaatgatcagattccattgcacatagaaacaact
agggagaatcaaaagaaagtaggaagagctagcaaacctacgaaaagggtaaaatcaatc
tctgcgaatatcttttctccgagtagccgggaagtggactacaatgaggctgctgccaaa
cttgaaagtatatacaagcttagccccacagttgaaacttctgacctggaacatgttgat
ggtttgaagaggagaggccaaaggagaaagaagagtggcgaagatgacaaagcaggtagc
aaaactagtaaaattgttgtcaggagccggaaaaggaaggcaaagcgattggatcttgat
aaaaggattgcactgagaaataggaaagaggaggagttagtggacgcaattacttcagtt
cggaagagaaaagatggtaaggatgaacatgagaagattgaacagctggtaagggagtat
tcaggtgccactgatttgggaagcttggactggaagaggatgaaaatacctcctgttctt
ccttccactgagcatgtttggctgttcaagttgatgcaacctttgaaggcactctttaag
gtgaaagaggaattgggaacaacgtttgggagagagccaacggatggtgaattagctgag
gccacaaatattagtgttgtccaaataagaaaacaaatagaggtcggtcaagcagcaaga
aacaaactcattaagcacaatctccgacttgtattatttgttatgaacaaatattttcaa
gactttgcaaatggccccaaatttcaagacctttgtcaggctggagtcaaggggcttatt
acagcaattgatcgctttcaaccgaggagaaatttgaggttgtcaacttatggatttttt
tggataaggcacgcaattgttcgttcaatgacactcacaagctttcggcgtgtctcattt
ggccttcaatctgttagacttgagatccagagagccaaacttgagctgttgattgagctc
caaagggaaccaacggaggaagaaattatcaagaaagttgggatatcgcctgagaggtac
caagaagtgatgagggcttcaaaacctgttctctcacttcattcaaggcatgctattacc
caagatgagtttatcaatggaattactgatattgaaggagataatcaaagacaacctgct
cttctcaggcttgctcttgacgatgtgcttgattccctgaagccaaaggagagcttagtg
atcaggcagagatatggtcttgatggtaaaggcgacagaacgttgggagagattgcgggg
aacctaaacatctcgcgagaaatggtacggaaatatgaagttaaggcactgatgaaactc
aagcatcctgctcgagtggatcatctccgccagtacattgtctga
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