Tripterygium wilfordii (thunder duke vine): 119983644
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Entry
119983644 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119983644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119983644
03036 Chromosome and associated proteins [BR:
twl03036
]
119983644
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119983644
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119983644
PBAF complex
119983644
GBAF(ncBAF) complex
119983644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
119983644
NCBI-ProteinID:
XP_038683262
LinkDB
All DBs
Position
18:complement(11650749..11654936)
Genome browser
AA seq
551 aa
AA seq
DB search
MEITHTNLNMKPVGPGEPELDLYTIPIQSSWFAWDDIHGTEKVALREFFDGNAISRTPRI
YKEYRDFIINKYREDPSRRLTFTEVRKSLVADVSLLNKVFKFLEQWGLINFGVSIDPVIE
GEESERVWVEEGAPNGVRVVAMPNSLKPVSVPQSVGGRQAVENVPKLPPLTSYTDTFGDL
IKRKGLVCRNCGERCGSGCYECTKDHYMICTKCFNNGNFGENKSVDDFKFINCSENSGDN
KVAWTEPETLLLLESILKHGDNWELVAENVQTKTKLDCIEKLIELPFGEFLLSSAQQRGN
FGGSNGDVNGLNQLELTPSQHQWNSKTEAQQPVQTNESEQNGNDVELGSHPSKRKCIALP
SDANSSLMKKVARISTMVSSQVTAAAAEAAVTTLCEESSFPREIFDGEEYNATNGLQSPT
LHYEQASAHQVDGSEMKHEHTLSENEDTSAKNDIPLTLQLRAATATTLGAAAAHAKLLAD
QEHREMENLVATIIDTLMKKLHRKIRHFEDLELIMEKEYAEMEQEKECIIAERIDVLQKT
FNAGISMWKSS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagatcacacacaccaacttgaacatgaaaccagtcggaccaggtgaaccagagctc
gacctctacaccattcctatccaatccagttggtttgcttgggatgatattcatgggacc
gagaaagtcgctctgagagaattctttgatggcaatgcaatctcaagaacgccaagaatc
tacaaggagtatagagacttcatcatcaacaagtacagagaggatccctcacggaggctc
accttcacagaggttcgaaagtcactggtggctgacgttagcttgcttaacaaagttttt
aagttcctggagcagtgggggttaatcaactttggtgtatccattgatccagtaatagag
ggcgaggaaagtgaaagggtttgggttgaggagggtgctcccaatggggttcgtgtggtg
gcaatgccgaattcgttgaagccagtttctgtgccacagagtgtgggggggagacaggct
gttgagaatgtaccgaaattgccaccattgacatcctatactgatacttttggtgatttg
attaagagaaagggcttggtttgcaggaactgcggagaacgttgtggttctggttgttat
gagtgtacgaaggatcattacatgatatgcacaaaatgcttcaataatggaaattttggg
gagaacaaatctgtggatgatttcaagttcattaactgcagtgaaaacagtggtgacaat
aaagttgcttggactgagccagaaactttacttcttttagaatctattttgaagcatggg
gataactgggagctagttgcagaaaacgttcaaacaaagactaagcttgattgtattgag
aagctcattgagcttccttttggggaatttttgttgagctctgcccagcaaaggggtaat
tttggtggctctaatggtgatgtgaacgggctaaaccagttggaattaactccatctcag
catcaatggaatagcaaaacagaggctcaacagcctgtgcaaacaaatgagagtgagcag
aatgggaatgatgttgaactgggttcccatccttcgaaaagaaaatgcattgctttacct
tcagatgctaacagttcactgatgaaaaaggtggctcgcatctcaaccatggttagttca
caagtcacagcagctgcggctgaggctgctgtgacaacactttgtgaggaaagctcattt
ccaagggaaatctttgatggtgaggagtataatgcaaccaatggtctgcagtctcctact
ctgcattatgagcaagctagtgcccatcaggtggatggttcagaaatgaaacatgagcat
actttatcagagaatgaggatacttctgccaaaaatgacatacctctaacattgcaactt
agagctgcaactgcaacaactcttggagcagctgctgctcatgcgaaattgttggctgat
caagaacacagagagatggagaatttagtggcaacaataattgatacactgatgaagaaa
ttgcaccgcaaaataagacattttgaagatctggagctaataatggagaaagaatatgct
gaaatggagcaagaaaaagagtgtataatagcggagcggattgatgtgctacagaagact
tttaatgcaggaatatccatgtggaaaagctcatga
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