Tripterygium wilfordii (thunder duke vine): 119983737
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Entry
119983737 CDS
T07256
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119983737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
119983737
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
119983737
SWR1 complex
119983737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
119983737
NCBI-ProteinID:
XP_038683387
LinkDB
All DBs
Position
18:9946640..9964272
Genome browser
AA seq
2037 aa
AA seq
DB search
MASKVPRSRLDHETRARRQKVPEAPKEPRRPKTHWDHVLEEMLWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKLKEEELRLRKIALNISKDVKKFWMKIEKLVHYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDKPLQQHAPHKEVVDTNETAELNVGNEPVE
LNTVPPPDVDEDFDIQSEDETEDDEQTIEDDEALITEEERQEELAALRSEVDLPLEELLK
RYAVGEEKGENGAEPSHMGVDYGKGKEDSFASVIDTSSSVAITGRRCDENNCAELNSENH
KAEDGLCHSKNLSNISGKADRERVLFDFGDDQEDVDFVLATGEEMDDETTLLEEEELAKA
DLNNPFDEITLLQKESEVPLEELLARYKKDFDYDEASEDESDYASALSEDLVDSPANEDT
GMKQQDMPTNEVVEPRECLQAAHPLEEEQEAAPESNFEEGRGNEDRIADAAAAARSAQPT
GNTFSTTNVRTKFPFLVKHPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALL
AHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKVKRQGWLKPNS
FHICITTYRLVIQDSKVFRRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP
LQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEIVDRLHNVLRPFI
LRRLKRDVEKQLPRKQEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQL
RKVCNHPDLFEGRPIVSSFDMSSMDIQLSSSICSITSRGPFSLVDLKGLGLVSTHNDFTM
TSWESDEVKAIATPSSFIEGRADMLVSEEIGRGYKHHKKLSGTNIFEDIRKAVLEERLRQ
AKERAASVAWWNSLKCQKKPMYSTTLRNLLTLNHPVDDIHCQKAGHVSYIYSSKLAAAIL
MPVERFQRMIDLVESFMFAIPAARAPTPLCWCSKTGTSVFLHPSYKEKCSEILSPLLSPI
RPALVRKQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINL
YGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWN
PAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFF
KKLDPMELFSGHRTLPMKNMQKEKNCNNGVEVSVSNADVEEALKFVEDEADYMALKKVEE
EEAVDNQEFAEETIGRLEDDELANEDELKADEPLNQGSLMITYDKDDGMMLDGNSHNEEQ
ALSFADKDDDVDMLADVKQMAAAAAAAGQAISSFESQLRPIDRYAIRFLELWDPIVDKAA
VESQVSFEDTEWELDRIEKYKEEIEAEIDDDEEPLVYERWDADFATEAYRQQVEVLAQHQ
LMEDLEYEAKLKDDTDDGNFDSMNEMSRDPKPKSKKKPKKAKFKSLKKGSLSSELKHLKE
EQSMELMSVDEDLDSHEVTDSDIVSPNSNMQKKRKKGELTFYLDEEKRSEKSKKTKKGPD
VDSGKQHYNFMELKSCESMVLDLEQKPSSRSKMGGKISITTMPLKRVLMIKPEKLKKGNL
WSRDCVPSPDFWLSQEDAILCAVVHEYGPHWSLVSDILYGMSAGGFYRGRYRHPVHCCER
FRELVQKYVLSAPDNQTNEKTGNAGSGKALLKVTEDNIRMLLQVAMEQPDNEFLLQRHFT
ALLSSVWRVASRFVRRQCILSSQNGLFGEKFSGSAINPKLQSTRKEPAKGIKFTNLGLSS
KLIAAALLDASCRIQDTGLRIFSHMEDVPAVQEQLEITLEFCEKDDHMFPLPHSLNLSIS
GTDLSTSVYKDMDHHHIRASTNVADNRLRASSRACLEGSLDWASSAFAANDMKTWSASKS
QSLGKHKLSATESIKPPKSKLKKTSPDHMEVRETFNERAFPPMVSGAPNNPYLRFDLTPA
IAHDDWIDDLDSSSPFCLNEVLSSDLVNFESIEHQYVPGLTSGLDDHILNAEFTDFR
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaggtaccgaggtccaggctcgatcacgagacccgagctcgccgccaaaag
gtgcctgaagctcctaaagaacctcgtcgccctaaaactcattgggatcatgtgcttgaa
gagatgctttggttgtcaaaggactttgagtctgagaggaaatggaaactggctcaggca
aagaaggttgctttaagagctagcaaggggatgttggatcaggctactaggggagaaaaa
aaacttaaggaagaagagctccggctgcgaaaaattgcacttaatatttcgaaagacgta
aaaaagttctggatgaaaatagagaagctggtgcattacaagcatcagatggagcttgat
gagaaaaagaaaaaggcacttgataaacagcttgagtttctcttaggccaaactgagagg
tactcaacaatgttagcagaaaatcttgttgataaaccactgcaacaacatgctccacac
aaagaagtggttgatactaatgaaactgcagaactaaatgttggtaatgaacctgtggaa
ttaaatactgtgcctcctccagatgttgatgaagattttgacattcaatctgaagatgaa
acagaagatgatgagcaaactattgaggacgatgaggctcttataactgaagaagaaagg
caggaagaactggcagctttgcgaagtgaagtagatcttcctcttgaggaattactcaaa
cgttatgctgtgggcgaagaaaagggtgaaaatggagctgaaccatctcacatgggagtg
gattatgggaagggcaaggaagattcatttgccagcgtgattgacacaagtagctcagtt
gctattactggtcgtcgttgtgatgaaaataattgtgccgaacttaactctgaaaaccat
aaagcagaagatggattatgtcattcaaaaaatctgtctaatatttctgggaaagcagac
agagaacgtgtgctctttgactttggtgatgaccaggaagatgtcgattttgttctggct
actggagaagagatggatgatgagaccaccttgttggaggaggaggaactggccaaagct
gatttaaacaatccctttgatgagattacgctactgcaaaaggagagtgaagttcctttg
gaagaattgcttgcaaggtataaaaaggactttgactatgatgaagcatcggaggatgaa
tctgactatgcctctgctttatctgaggaccttgtggattctccagctaatgaagacact
ggtatgaagcagcaggatatgccaaccaatgaggttgttgaaccccgtgaatgtctgcaa
gctgcacatcctcttgaagaagaacaagaggcagcccctgagagtaatttcgaagaagga
agggggaacgaggatagaattgctgatgctgctgctgctgcaagatctgcacaacctaca
gggaatacattctcaacaacaaatgtgcgtacaaagttcccttttcttgtgaagcacccc
cttcgcgagtatcaacacattggcctggattggcttgttacaatgtatgaaaagagatta
aatggaattctagccgatgaaatgggacttgggaagactatcatgacgattgccctactc
gcacacctggcatgtgataagggaatatggggtccccatctcattgtggtaccaacaagt
gtcatgcttaactgggaaactgagtttcttaaatggtgtcctgcttttaagattctaacc
tactttgggagtgcgaaagagcgcaaagttaagagacaaggttggttaaaaccaaattcg
tttcacatttgcataacaacttatagactggttatacaagactcgaaagtcttcaggcgg
aagaaatggaaatacttgattctggatgaagctcatctgattaaaaattggaagtcccag
agatggcaaacacttctgaactttaactcaaaaaggcgtattttgttaactggtacgcct
ttgcagaatgatctcatggaactttggtcattaatgcatttcttaatgcctcacatcttt
cagtctcatcaggaattcaaggattggttctgtaatccaatatcaggtatggtagagggg
caggaaaaagtgaacaaagaaattgttgatcgtcttcacaatgtactccgtccatttata
cttcggcggctgaaaagggatgtggaaaagcagcttcctaggaagcaagagcatgtgata
tattgtcgactctcaaagaggcaacggaacttgtatgaggacttcattgctagctcagag
acacaagctacccttgcaagtgcaaatttttttggaatgattagtgttattatgcaacta
cgtaaagtttgcaatcatcccgacttatttgagggtcgtccaattgtaagttcttttgat
atgagcagtatggacatccagttgagttcttctatttgttcaataacttcccgtgggcca
ttctctttggtggatcttaaaggtttgggattagtgtctactcataatgattttaccatg
acttcttgggagagtgatgaagtgaaagctattgctactccctcaagctttattgaagga
agagctgacatgcttgtgtcagaagaaattgggcgtggatataagcatcataagaagttg
tctggcacaaatatttttgaagacatacggaaggcagtcttggaggagagacttagacaa
gcaaaggaaagggcagcatctgttgcatggtggaattccttgaagtgccagaaaaaacca
atgtattcaacaaccttgcggaatctcctcacactaaatcatcccgtagatgatattcat
tgtcaaaaagctggccatgtgtcttacatttattcctctaagcttgctgctgctattctt
atgccagttgaacgcttccagcggatgattgaccttgtcgaaagcttcatgtttgcaatc
ccagcagctcgagccccaacgcctctatgttggtgcagtaaaactggtacttctgtattt
ctgcacccaagttacaaggagaaatgctctgaaatcttatccccgcttctgtcacccatt
agacctgcacttgtccggaagcaagtatatttcccagacaggcgacttatacagtttgac
tgtggtaagttgcaggaattggcaattttgttaaggaaattgaaatcagaaggtcaccga
gcattaatatttacccagatgacaaagatgcttgatatcttggaggctttcattaattta
tacggttatacttacatgcgtttagatggatccactccaccagaggagaggcaaacatta
atgcagaggttcaacacaaatcccaaaatttttctctttattttgtcaacccgtagtggg
ggagttgggatcaaccttgttggggcagatacagttatcttttatgatagcgactggaat
cctgccatggaccagcaagctcaagatcgatgtcatcggataggacagacacgtgaagtg
catatctacaggttaattagtgagagcaccattgaagagaacatattgaagaaagcaaat
cagaaacgcgctcttgatgatcttgtgatacagagtggaggttacaacactgaattcttc
aagaaacttgatcctatggagctgttctctggtcatagaacacttcctatgaagaacatg
cagaaagaaaagaattgcaataatggggttgaggtttctgtgtctaatgcggatgtggag
gaggctttgaagtttgtagaagacgaagcagattacatggcactgaaaaaagttgaagag
gaagaggctgtggacaaccaagagttcgcagaagaaaccattgggagactagaagatgat
gaacttgctaacgaggatgaattgaaggctgatgagccgctgaatcagggtagcctgatg
ataacgtatgataaagacgatgggatgatgttagacgggaatagtcataatgaagagcaa
gctttaagttttgcggacaaagatgatgatgttgacatgctggctgatgttaagcagatg
gcagcagctgcagcggcggctgggcaagctatatcatcatttgagagtcaactacgtcca
attgatcgatacgcaatacgttttctggaattgtgggatccaattgtagacaaagcagct
gtagaatctcaagttagctttgaggacacagagtgggaacttgatcgcatagagaagtac
aaggaagagattgaagctgagattgacgatgatgaggaacctcttgtttatgaaagatgg
gatgctgattttgcaaccgaggcgtacagacagcaagttgaggtcttagctcagcatcaa
ttgatggaagaccttgaatatgaggcaaaattgaaggatgatacagatgatggaaatttt
gattcaatgaatgaaatgtcaagggatcctaaacccaagtctaagaagaaacctaagaaa
gccaagttcaaatccttgaagaaaggatctctcagttctgagttgaaacatctgaaagag
gagcagtcaatggaacttatgtctgtagatgaagatttagattctcatgaggtcacagat
tcagatatagtttcaccaaactcaaatatgcagaaaaaacgtaagaagggtgaattaaca
ttttatctggatgaagagaagcgctcagagaagtcaaagaaaaccaaaaagggtcctgat
gtagattctgggaagcagcattacaattttatggaactaaaatcctgtgaaagcatggtt
cttgatcttgagcagaaaccttcgagcagaagcaaaatgggtggaaagatttcaatcact
acgatgccattaaagcgggttttgatgataaaacctgagaaattgaagaagggaaacctt
tggtccagagattgtgttccatcacctgatttttggttgtcacaggaggatgccatatta
tgtgctgttgtacatgagtatggcccacattggagcctggttagtgacatactgtatgga
atgtctgctggtgggttttataggggtagatatcgccatccagtgcattgttgcgagagg
tttagggaacttgtccaaaaatatgttttgtctgctccagacaatcaaacaaatgagaag
acaggcaatgcgggctctggaaaggctcttcttaaagtaaccgaggataatattcgaatg
ctgttacaagttgccatggagcagccagataatgagtttcttcttcagagacacttcact
gccctgctttcatctgtctggagggtagcatctcgttttgttcgccggcagtgcatttta
tcatctcaaaatggtctttttggtgaaaagttttctggctctgcaatcaacccaaaattg
caaagtacgagaaaggagcccgcaaaagggattaaattcactaatttagggctgagtagc
aagttaatagcggcagccctccttgatgccagctgtagaatacaggatactggattgcgt
attttcagccatatggaagatgtcccagctgtccaagaacaattggagataacactggaa
ttttgtgagaaagatgaccacatgtttcctttgccacattccctgaacttatcaatatct
ggcacagatttgagcacatctgtgtataaggatatggatcatcaccatattagagcttcc
acaaatgttgctgataaccgcttaagggcttcatcaagagcttgtcttgaaggtagcctg
gattgggcttcatctgcctttgctgcaaatgatatgaagacatggtcagcttcaaagtca
cagtcactgggaaaacacaaactctctgccacagaatcaatcaaacctcctaaatcaaag
ttgaaaaagacatcgccagaccatatggaggtacgcgagacattcaatgagcgtgcattc
ccgccaatggtgtcaggtgcacctaacaatccatatttacggtttgacctgacaccagcc
attgcccatgatgattggatagacgatctggatagtagttctcctttttgcttgaatgag
gtgctttcatcagatttggtgaattttgaatccatcgaacatcagtatgtccctggctta
acctcaggacttgatgatcatatactgaatgcagaatttactgattttaggtag
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