Tripterygium wilfordii (thunder duke vine): 119983893
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Entry
119983893 CDS
T07256
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twl03016
]
119983893
Enzymes [BR:
twl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
119983893
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119983893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Ribonuc_2-5A
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
119983893
NCBI-ProteinID:
XP_038683560
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Position
18:complement(10480261..10483344)
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AA seq
454 aa
AA seq
DB search
METRCSFWLPKKNRFCATAPLHGSTFCGNHSPRSQSQWIPCPIDPSHSVLEENLEGHVKR
CPFLKNVQSLALQPYYHKGINAGSEEVGQQRNTLSLDKDITSEMKRSAVYSMSIPEFQDL
LRKIRNIHSSICKDIRDSYKIPEACGIWIKREVDRKLPFQEKHVMQQASILGNLEDIGVL
KTSFESEQLDNEDPYRDDDGVLPAVIEFGAGRGYLTQMLADGYGIKKVFLVERKSYKLKA
DRSLRQKESLILERLRIDIEDLNLSAVESLHGVPYLAIGKHLCGPATDLTLRCCLGEQSS
EDNLGQSIGHHYPIGLAIATCCHHLCQWKHYINKKYLCNLGIKKEEFHAITWFTSWAVDA
DHSSDITDVTNGRRLHFDSIGKEECGEDVNTVEEIVRNMKAVERAVLGFMCKQIIDIGRS
MWIMERGFKTRLVKYVPSSISPENHLLVSRCVQQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgctgcagtttctggctccccaagaagaatcgattctgtgccactgctcct
ctacatggttccacgttctgcggcaatcacagcccgaggtctcagagccagtggatccca
tgcccaattgacccttctcattctgttcttgaggaaaatctagaagggcatgtaaagaga
tgcccatttctgaagaatgttcaatctttggctctccaaccttattaccataaagggatc
aatgctggcagtgaagaagtagggcaacagcggaatacactgtctttggataaggatatt
acttctgaaatgaagaggagtgctgtttatagtatgagtataccggaatttcaggatttg
ctcagaaaaattcggaatatacacagctcaatatgtaaggatattagggattcgtataag
ataccagaagcttgtggtatatggatcaagagagaagtagacaggaagttgccttttcaa
gagaagcatgttatgcagcaggcttccatattggggaacttagaagatattggagtctta
aagacttcttttgaaagcgagcagcttgacaatgaggacccttacagagatgatgatggt
gttctccctgcagtgattgaatttggagctgggagagggtacttgacacaaatgcttgca
gatggctatgggatcaaaaaggtctttctagttgagaggaagtcatacaaactgaaggct
gatcgatccttgcggcagaaagaaagcttgattttagagcgtttgagaattgacattgag
gatctaaatttgagtgctgtcgagtccttacatggagttccttatcttgctattggtaaa
cacctctgtggacctgcaacagatttgactttaagatgttgcctgggagaacaatctagt
gaagataatcttgggcagagcatcggtcatcattatcctataggcttggctatagcaacc
tgttgccatcatctttgccagtggaagcactacataaataaaaaatatttatgcaacttg
ggaattaagaaggaagaattccatgcaattacttggtttaccagctgggcagttgacgcg
gatcatagttcagatattactgatgttactaatgggaggagattgcactttgactctatt
ggtaaagaagaatgcggtgaagatgtcaacacagttgaggaaattgtgaggaatatgaaa
gctgttgaaagggcagttttgggctttatgtgcaagcagatcattgacatagggagatcg
atgtggatcatggaacgtggtttcaaaacacggcttgtgaagtatgttccttctagtata
tctcctgaaaaccatttactagtttctcgatgtgtccaacaatag
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