Tripterygium wilfordii (thunder duke vine): 119984180
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Entry
119984180 CDS
T07256
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119984180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119984180
Spliceosome [BR:
twl03041
]
Common components
Common spliceosomal components
SR proteins
119984180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119984180
NCBI-ProteinID:
XP_038683935
LinkDB
All DBs
Position
18:complement(12342061..12346384)
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AA seq
374 aa
AA seq
DB search
MMRPIFCGNFEYDARQSDLERLFRRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRAE
FGQKGRRLRVEWTKHERGIRRPGSSKRSSTSSKPSKTLFVINFDPYHTRTKDLERHFEPY
GTIASVRIRRNFAFVQYESLEDAAKALEATNMSKLTDRVISVEFAIRDDDERKYSPDRNR
DRSPDRRNYDRRRSPSPYRRERGSPDYGQGSSPNPTRRERASPDYGRGRGRSFSPHKRDR
TSPDYGRGSSRSPYRREKLGTDHGRGRSRSPYRRERASPDNGRGPSQSPYRKEKPSPENG
RGPGNSPYRRERDNSKNGQDSSISPYSRDRGSPNNGRGPSPISMPEPRDSPDNFGGAESP
MPEIYHSHSPPGEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggccaatcttctgtgggaactttgagtatgatgctaggcaatctgatctggaa
cgtctgtttagaagatatggacgagttgaaagggtggatatgaagtctggttttgctttt
atctacatggaagatgagagagatgctgaggatgcaattcgaggacttgatcgtgcagaa
tttggtcagaagggtcgcaggctgcgtgttgaatggactaagcatgaacgtggcatcaga
aggcctgggagctcaaaaagatcttcgactagttctaaaccttcaaagaccttgtttgtt
attaattttgatccatatcataccaggactaaggatttggagaggcattttgagccatat
gggacaatagcaagtgtaaggatcagaagaaattttgcatttgttcagtatgaatcacta
gaggatgccgcaaaggccttagaagctacaaatatgagcaagctaacggaccgagttatt
tcggtggagtttgcaattcgggatgatgatgaacggaaatatagccccgacagaaatcgt
gataggtccccggacaggagaaactatgataggaggcgctcaccaagtccctatcgtaga
gaaaggggtagccctgattatggccaaggctctagccccaatcctaccaggagagagagg
gcgagccctgattatggtcgtggtcgtggtcgcagctttagcccccataaaagagacagg
acaagccctgattatggtcgtggttcaagtcgtagtccttacaggagagagaagcttggc
acagatcatgggcgtggccgcagtcgtagtccttaccgtagggagagggctagtcctgac
aatggtcgcggtcccagccagagtccctatcgaaaagagaagcctagccctgaaaatggt
cgtggccctggcaatagtccttatagaagggagagggacaactctaagaatggtcaagac
agcagcattagcccgtattctagagatagagggtccccaaataatggtcgtggacccagt
ccaatttcaatgcctgagcctagggacagtcctgacaactttggtggagctgaaagcccc
atgcctgagatatatcacagccattcacccccgggagaggaatga
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