Tripterygium wilfordii (thunder duke vine): 119984204
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Entry
119984204 CDS
T07256
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119984204
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119984204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Sipho_Gp157
AAA_21
SMC_hinge
SbcC_Walker_B
ABC_tran
EzrA
Motif
Other DBs
NCBI-GeneID:
119984204
NCBI-ProteinID:
XP_038683968
LinkDB
All DBs
Position
18:11986865..12003640
Genome browser
AA seq
1058 aa
AA seq
DB search
MGDSRVFSNYSIYPQRSEGGIILRIRLENFMCHSNLQIELGEWVNFVTGQNGSGKSAILT
ALCVAFGSRAKATDRASTLKDFIKTGCSYAVVHVEIKNQGEDAFKREIYGDVIIIERRIT
ESTSTTVLKDYQGKKVAGRRGELRELVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFK
FFYKATLLQQVNDLLQRIHESLSSASALVDEMETSIRPIQKELGELQGKIKNMEHVEEIR
QQAQQLKKKLAWSWVYDIDKQLQEHSLKTTSFKDRIPTCQEKIDKELEKVETLKDRFTKK
KAQIEVMMQKTSEVRRKKDELQQTISLAKKEQLQLEEEHGRKNKTIQNMVRRLRLLERQV
QDLQEQHVKNTQAEEIEIEETLKALQREVDTINSTLLRFKEEESALSERLSVGMIEIKKI
EEEMQEYEKKHRELKFSITELRQHRTNKVTAFGGDRVISLLRSIERHQHKFKRPPIGPIG
VHLTLVNGDTWARAVEAAIGNLLNAFIVTNHTDSLILRKCAREANYNYLQIIIHDFSRAR
LNIPPNMLPQTQHPTTLSVIDSDNDTVMNVLVDMGHAERQVLVRDYDVGKAVTFDQRVFN
LKEVYTLDGYKMFFRGSVQTILPPNRKQRNARLCGSFDDQIKDLERDAFGVEEEAKQCRK
RRKDAEEKLQGLKDTLHTVKRRRMDAEHSLSTKNMALRDVKNVYAVQTSASQASTVDELH
EEISKVQEEIQKMRLLLDNVQERMNEAIAKNKDLRSSFEHLCELAKDEIGAFEGAEQDLM
KIEKDLQSAEAEKAHYENVMRNKVLPDIKRAEEQYQKLQDDREESSRKASIIVPESEIEA
LGDWDGSTPEKLSAQLDRLNQRLKHESQRYSESIDDLRMMYEKKKRKISRKQKTYDAFRE
KLNACQKSLHSRWTKFERNATLLKRQLTWQFNGHLRKKGISGHIKVSYEEQMLSVEIKMP
QDASSSSVRDTKGLSGGERSFSTLCFALALHGMTEAPFRAMDEFDVFMDAVSRKISLDTL
VDFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctagggttttctccaattactccatttacccacagcggtccgaagggggc
attattcttagaatccgattggagaattttatgtgtcacagtaacctccagatcgagctg
ggcgagtgggtcaatttcgtcactggccagaatggaagtggcaagagtgcaatacttact
gctctctgtgttgcctttggctcccgcgctaaagctactgatagggcatctacgctgaag
gattttataaaaactggttgcagctacgctgttgtgcacgtggaaataaaaaatcaaggg
gaggatgcttttaagcgtgaaatctatggtgacgtcataattattgaacgcaggataact
gaatctaccagcacaactgttctaaaggattatcaaggaaaaaaggttgccggtcggaga
ggagagctccgtgagcttgtagagcactttaacattgacgtcgagaatccgtgtgttata
atgagtcaagacaaaagcagggagtttttgcattctggaaataacaaagataaattcaag
ttcttttacaaggcaacgcttctacagcaagtcaatgatcttctacaacgtatacatgag
agcttgagttctgcaagtgcacttgttgatgaaatggagacttcgataagacccatacag
aaggaacttggtgagctccaggggaaaataaaaaacatggagcatgtcgaagaaataaga
cagcaggcacagcagttgaagaaaaaacttgcttggtcatgggtgtatgacatagataag
cagctgcaggaacattctttaaagaccacaagctttaaagatcgtatacccacctgccaa
gaaaaaattgacaaggaattagaaaaagtggagacattaaaggaccgcttcactaaaaag
aaagcacaaattgaagtcatgatgcaaaagacatcggaagtgaggagaaagaaagatgag
ttgcagcagactatttccttggcaaaaaaagagcaacttcagctggaagaagagcatggc
cggaaaaataaaacaatccagaacatggtgaggcgtttaaggttgcttgaacgtcaagtc
caggatcttcaagaacaacatgttaaaaatacacaggctgaagaaatcgagatagaggaa
acgctgaaggcactccaacgcgaagttgatactataaattcaacacttttaaggttcaag
gaagaagagagtgccttgtctgaaagactatcagttggaatgatcgaaataaaaaagatt
gaagaagagatgcaagagtatgagaaaaagcatcgtgagcttaaatttagtatcactgag
cttcggcaacatcggactaacaaggttacagcctttgggggagacagagtaatttctctc
ttgcgcagcattgagagacatcaacacaagttcaaaaggccaccaataggtccaattggt
gtccacttgactttggtaaatggtgatacatgggctcgtgcagttgaagctgcaatagga
aatctgctcaatgctttcattgttaccaatcataccgattctctcattctgagaaaatgt
gccagggaagccaattacaattatcttcagattattatacatgacttctcaagagcaagg
ttgaatataccacctaacatgcttcctcaaacccagcaccctactacactctctgttata
gattctgacaatgatactgtaatgaatgttttggtggatatgggacatgctgagaggcaa
gtgcttgttagagattatgatgttggaaaagcggttacttttgaccaaagggtctttaat
ctgaaggaggtgtacactttagatggttacaaaatgtttttccgaggttcagtccagaca
attcttcctccaaataggaagcaaagaaatgctcgtctttgtggctcttttgatgaccaa
attaaggatcttgaaagggatgcatttggtgtggaagaagaagctaaacagtgcaggaag
aggagaaaggacgcagaggaaaagcttcagggtcttaaagatactctccatactgtcaag
aggaggcgcatggatgcagaacacagcttgtctactaagaacatggcactacgggatgtg
aagaatgtatatgctgtccaaactagtgcttcacaagcatcaactgttgatgagcttcat
gaagaaatttcaaaagtccaagaggagatacagaaaatgagactgttattggacaatgtc
caagagaggatgaatgaagctatagcaaaaaataaagatcttagatcttcatttgagcat
ttatgtgagttagcaaaagatgaaattggtgcctttgagggagcagagcaggatctaatg
aagattgagaaagatctacaatccgcagaagcggagaaagctcattatgaaaatgtaatg
agaaacaaggtcctacctgatatcaaacgagcagaagaacaatatcagaaacttcaggac
gatcgtgaggagagtagcaggaaggcctctattattgttcctgaaagtgaaattgaagct
ctgggagattgggacgggagcacccctgagaaactcagtgcacagttagacagactgaat
cagagacttaagcatgagagccaacgatactctgaatccatagatgacctcaggatgatg
tatgagaaaaaaaagcggaagatttcaagaaaacagaaaacctacgatgcatttcgagag
aagttgaatgcttgccagaaatccctacattcacggtggacaaagtttgaaaggaacgca
acccttttaaagcgccaactgacttggcaatttaatgggcatttgagaaaaaaagggatt
agcgggcacattaaagttagttacgaagaacagatgctgtcagtggagataaagatgccc
caagacgcttcaagcagcagtgttcgtgatactaaagggctttcaggtggtgagcgttcc
ttttcgacattatgttttgcactcgcacttcatggaatgacggaagccccatttcgggcc
atggatgaatttgatgtattcatggatgcggttagtaggaaaatcagcctagataccctt
gtggattttgcattggcgcaaggttcccaatggatatttatcaccccacatgatatcagc
atggtcaaacaaggggaaaggataaagaagcagcagatggcagctccgcgttcttga
DBGET
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