Tripterygium wilfordii (thunder duke vine): 119984325
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Entry
119984325 CDS
T07256
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119984325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119984325
03036 Chromosome and associated proteins [BR:
twl03036
]
119984325
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119984325
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119984325
Chromatin remodeling factors
BAF complex
119984325
PBAF complex
119984325
GBAF(ncBAF) complex
119984325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
119984325
NCBI-ProteinID:
XP_038684123
LinkDB
All DBs
Position
18:3227620..3240794
Genome browser
AA seq
2258 aa
AA seq
DB search
MQSSGGGGGGPGRTPAGRTGSSSSAASPSSSSSAVSTPHLGFYSVHQQQQQQQQQQQQHI
GTRQSFQQQLLRKPEGNESLLAYPAGLQGIMGGGSFASSPGSMQIPQQSRNFFDLPQQPG
STQEGQTRSQGVEQQMLNPVHQAYLQYAFQASQQRSSLQSQQQAKMGMLGASSGKDQDIK
MGNKKIPEHSSMQAVSQAQASSSKNSAEHFPRDEKQIEQGKQLAPDQRNESKSTVQPAGI
RQLMPSNMVRPMPIQQPQKNIQNLSNNQLAVAAQLQAMQAWAAERNIDLSNPANANLLAQ
LIPLMQSRMAAQPKANESSMAAPAAPVAKQQVTSPTVASDSSPHTNSGNEISGQSLSAKA
RQPVPSGPFASTSSFGVVNNMNTTAGQQLAVTVKDSQVHLRQSPGFANGMLPMQPLQSSS
SVGSGVDQTLPAKNSPGVSETLQMQYLRQLNRSSPQPAAPSIEGGSGNHFPSQGGSALQM
PQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAVVPPPLELQLQQQFLPAGGSN
QERTSGKIAEVQARHMDSSEKDCQALTSANGNNFPKEEASAGDEKATVSAMHIQNAPATM
KEPTTLVAAGKEEQQSAIFSAKADQEVDCVPSKTHTKSDFTGDKGKTVSPHAALSDTMQA
NKPVQASTACQQKDAGAARKYYGPLFDVPYFTRKHDSVGTTGMLNNNNSLTLAYDVKDIL
FEEGTEVLKKKRSENLKKVSGLLAVNLERKRIRPDLVLRLQIEEKKLRLADLQARLRDEV
DQQQQEIMAMPDRLYRKFVRLCERQRMELIRQVQASQKAMREKQLKSIFQWRKKLLEAHW
AIRDSRTARNRGVAKYHERMLREFSKRKDDDRSKRMEALKNNDVERYREMLLEKQTSMPG
DASERYAVLSSFLSQTEEYLHKLGSKVTASKNQQEVEEAATAAAAAARLQGLSEEEVRAA
AACAGEEVMIRNRFIEMNVPRDGSSVNKYYTLAHAVTERVVRQPSMLRTGTLRDYQLVGL
QWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIVVPNAVLVNWKSEL
HSWLPSVSCIFYVGAKEQRSKLFSQEVSALKFNVLVTTYEFIMYDRSKLSKVDWKYIIID
EAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDW
FSQPFQKEGPAHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLR
CRMSAIQSAIYDWIKLTGAIRVDPEEEKLRLQKNPTYQVKVYKTLKNRCMELRKACNHPL
LNYPYFSDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRL
IYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPK
NEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYMGS
IEGLIRKNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLL
EVNRMIARSEDEIELFDQMDEDLDWTEEMTSFDQVPKWLRASTKEVNAVIASLSKKPYKN
TLYAGSIGMESSEKEPERKRGRPKGKKPPNYREMDDENGEYSEASFDERNEYSMHEEEGE
IGEFEDDEFSGAVGAPPVIKEQSEDDSPQCDGGYGYHQALEGTRNHRMVEEAGSSGLEGT
RNHMVEEAGSSGSSSDSRRVTQMVSPVSSQKFGSLSALEARPGSVSKRLPDELEEGEIAL
SGDCHVDHQQSGSWNHDRDEGEDEQVVQPKIKRKRSIRLRPRHTVERLEEKSGYEAPSVQ
RGDSGLLAFQVDHKYQPQLRANTELKSLGDSNDSKFDRSDSAKGRGTLSSRRIANTSKSH
PSSKPSRLNLQYTSAEDPLDHSGENLDSKGTQTSGTPMVGPRMSDVLQRKCKNVVGKLQR
RIEKEGHQIVPLLTDLWKRIENSGYATGAGSSLLDIRKIDQRVERLEYAGVVDLVVDVQF
MLKSAMQYYSYSHEVRSEARKVHDLFFDILKIAFPEADFREARNAISFSGQGSISTAASP
RLVAVGQSKKHKLINEVEPDMGNPQKPMVRMHMPQKDLRLGSGNITGRDQCQQDDSSRLT
HPGELVICKKKRKEREKTLVKSRSGSTGPVSPPSVSRNMRSPGSGSVSRDVRLSHQATEQ
GWANQPAQSANGPGGTVGWANPVKRLRTDAGKRRPSHL
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctagtggtggcggaggtgggggccccggccggactccggcagggcgtacgggg
tcctcgtcatctgcagcttcgccgtcttcatcctcatctgctgtatcaacgccacacttg
gggttttattcagtgcaccagcaacagcagcaacaacagcagcaacaacagcaacatata
gggactaggcagtcatttcagcaacaattactaagaaaacctgaaggaaatgaatccctt
ctagcttatccagctggtctacaggggattatgggcgggggcagtttcgcttcatctcca
ggctcaatgcaaattcctcaacagtctaggaatttctttgatttgcctcaacaacctggt
tccactcaggagggccagactaggagtcaaggcgtggagcaacaaatgctaaatcctgtt
caccaggcttatcttcaatatgcctttcaggcttcccaacaaaggtcatctttgcagtca
cagcaacaagcaaagatggggatgttgggcgcttcatctggaaaggatcaggacataaag
atgggaaataagaaaataccggaacacagttctatgcaggcagttagtcaggctcaggca
tcatcctccaagaactctgctgaacatttccctcgtgatgaaaagcagatagaacaagga
aagcagctggcccctgatcagagaaatgagtcaaaatctactgtccagccagcaggtatt
agacaattaatgccctcaaatatggtaaggcctatgccaatacagcagccacagaaaaac
attcaaaacttgtcgaacaaccagcttgcagtggctgcacagttgcaagcaatgcaggca
tgggctgctgagcggaatatcgatttgtcaaatcctgcaaatgccaacttgttggctcag
ctaattccactcatgcagtctaggatggctgcgcagcccaaagcaaatgaaagtagcatg
gctgcaccggctgctccagtggcgaagcagcaggttacttctcccactgttgcaagtgat
agttctccccatactaattcaggaaatgaaatttcagggcagtctctctctgcgaaagcc
aggcagccagttccatcgggtccttttgcttcgacttccagttttggggtagttaataac
atgaacaccactgcagggcagcaattagctgttactgtcaaagatagccaagtacatctg
agacagtcacctgggtttgcaaatgggatgctgcccatgcagccccttcaatcatcgtca
agtgtgggctcaggtgtggatcaaactttacctgcaaaaaattcgccaggtgtttctgaa
actttgcagatgcaatacctcagacagttgaatcgatcttctccacagcctgctgcacct
tctattgagggaggctcaggcaaccatttcccatcacagggtgggtcagcactccagatg
ccacagcagcgttttgggttcaccaaacagcagttgcatgttctaaaagcacaaatacta
gcatttaggcgattgaagaaaggcgaaggtactcttccgcaagagcttcttcgagctgtt
gttccaccaccccttgagttgcagctgcagcaacagtttcttcctgctggaggaagtaat
caggaaagaacttctggtaagattgcagaggtccaagcaaggcatatggattccagtgag
aaggattgtcaggctctaacatcagctaatggaaataactttccaaaagaggaagcttct
gcaggggatgaaaaagcaactgtatcagcaatgcatatacaaaatgcaccagctacaatg
aaagaacctactactttggtagctgctggaaaagaagaacaacaatctgctattttttct
gctaaggcggaccaggaagttgactgtgtaccttcgaaaactcatactaaaagtgatttt
acaggagataagggaaagactgtttcaccacatgctgccttgtctgatacaatgcaagcc
aataaacctgtgcaagcaagcactgcttgtcagcaaaaggatgctggagctgctagaaag
tattatggaccactttttgatgttccatattttaccaggaaacatgactcagttgggacc
actgggatgttaaataacaataacagtctaacattggcatatgatgtcaaagatatactt
tttgaggaaggcacggaagtgcttaaaaagaaacggtcagaaaatttgaagaaggtaagt
ggtttactggcggtcaatttggaacggaaaaggattaggccagatcttgttttgcggtta
caaattgaagaaaagaagcttcggcttgcagatctacaggcacgattgagagatgaagtt
gatcaacagcagcaggagataatggcaatgcctgataggctatacaggaagtttgtgcgt
ttgtgtgagcgtcagcggatggagctgataagacaagtacaggcctcccagaaagccatg
agggagaagcagttgaaatccatctttcagtggcgtaagaaacttcttgaggctcattgg
gccattcgtgattcacgaactgcccgtaataggggagttgccaaatatcatgagagaatg
ttgagggagttctcaaagagaaaggatgatgatcggagtaaaagaatggaggcattgaag
aataatgatgttgaaaggtacagggagatgctgctggagaagcagacaagcatgccgggt
gatgcttcagagagatatgctgttctctcatcatttttgagtcagactgaagaatatctt
cataaactgggaagtaaagtaacagcttccaaaaatcagcaagaagtagaggaggcagca
acagcagccgctgctgcggcgcggttgcagggtctctcagaagaagaagtgagagcagca
gcagcttgtgctggagaagaagtaatgataagaaatcgcttcattgaaatgaatgtcccc
agggatggttcatctgtcaacaagtattatacccttgcacatgctgtaactgaaagggtt
gtgaggcaaccttctatgttacgcactggaaccttacgagactatcagcttgttggattg
caatggatgctttctttgtataataataagttgaatggaattttggcagatgagatgggt
cttggaaagactgtccaggttatggcattgattgcttatctgatggaatttaaggggaac
tatggcccacatcttatagttgttcccaatgccgttttggttaattggaagagtgagttg
cacagttggctgccctcagtttcatgcattttctatgttggtgcaaaggagcaaagatca
aaattattttctcaagaggtttctgccctcaagtttaatgttctagtgacaacctatgaa
ttcatcatgtatgatcgctcgaagctctctaaagttgattggaagtatattattattgat
gaagcacagcgaatgaaagacagagaatcagttttagctcgtgatcttgatagatatcgc
tgccagcggcgcctacttctaactgggacaccattacagaatgatttaaaggaactgtgg
tcacttttaaatctactgcttcctgaagtattcgataatcggaaagcatttcatgattgg
ttctcacaaccctttcaaaaagaaggtcctgcgcataatgctgaagatgactggcttgag
accgagaaaaaagtcataattatccatcgacttcatcaaattctggagccctttatgctc
agacgtcgtgtagaggatgtggaaggttcacttccacccaaggtttccattgttttgaga
tgtcgaatgtcagctattcagagtgccatttatgattggatcaaattgactggtgcaatt
cgagttgatcctgaagaggagaagcttaggcttcagaagaatcctacatatcaggttaag
gtgtataaaactttaaagaaccggtgtatggagcttcgaaaagcttgtaatcatcctttg
ctcaattacccctacttcagtgatttttccaaggatttcctggttagatcttgtggaaaa
ctgtggatcctggacaggatcctcataaagcttcagagaacaggacatcgagtactgctc
tttagtaccatgacaaaacttcttgatatattggaggaatacttgcagtggaggcgactt
atatacaggagaattgatggaacaaccagcctggaggatcgtgagtcagcaatagtggat
tttaatagccctgattcggattgctttattttcttgcttagtattcgagcagctggacgg
ggcctcaaccttcagtcagctgacacagtaattatatatgatcctgatccaaaccctaaa
aatgaggagcaggcagttgctagagcacaccgcattggacagaagagagaagttaaagtc
atatatatggaagcggttgttgacaaaatctccagccatcagaaagaggatgaattaaga
agtggaggtactgttgatttagaagatgaccttgctggtaaggatagatatatgggttcc
attgagggcctcataagaaaaaatatacagcagtataagattgacatggctgatgaggtt
attaatgctgggcgttttgaccaaagaacaacgcatgaagagagacgcatgactttagag
acgttattgcatgatgaggagagatatcaagaaaccttacacgacgttccctcgctgctg
gaggtaaatcgcatgatagcaaggagtgaagatgaaattgagttgtttgatcagatggat
gaagatctggattggactgaggagatgaccagctttgaccaggtgcctaagtggcttcga
gccagcacaaaagaagtgaatgctgttattgctagtctgtcaaagaaaccatataaaaat
actttatatgctggaagtattggtatggagtcttctgaaaaggaacctgaaagaaaaagg
ggccgtcccaaggggaaaaagccccctaattacagggaaatggatgatgagaatggagaa
tactctgaagcaagttttgatgagagaaatgaatattctatgcatgaagaagagggagaa
attggggagtttgaagatgatgaatttagtggtgctgttggggcaccacctgtcattaaa
gagcagtcagaagacgacagtccgcaatgtgatggcggatatgggtatcatcaggcttta
gaaggcactagaaaccatcgtatggtcgaagaagctggctcatcaggtttagaaggcact
agaaaccatatggtggaagaagctggctcatcagggtcatcgtcagacagccgaagagtt
acacagatggtatctcctgtttcttctcagaaatttggttccctgtctgcattggaagct
agaccaggttccgtttctaaaaggctgccagatgaactagaggagggggaaattgcatta
tctggagattgtcacgtggatcaccagcagtctggtagttggaatcatgatcgtgatgag
ggtgaagatgaacaggttgtgcagccaaaaataaagcgaaaacgtagtattcggcttcgg
ccacgccatactgtagaaaggctggaagagaagtctggttatgaagcaccatctgtacaa
cgtggagattcaggtttgctggcgttccaagtggaccataaatatcaaccacagttgagg
gctaatacagaattgaaatcacttggagattctaatgattccaagtttgatcgaagtgat
tctgcaaaaggtaggggaaccttgtcgtcgaggaggatagctaatacatcaaaatcacat
ccatcatcaaaaccaagtagattgaatctgcagtatacttctgcagaagatcctcttgat
cacagtggagagaatttggattctaaagggacacagacaagtgggactccaatggttggc
cctagaatgtctgatgtacttcagagaaagtgcaagaatgtggttggcaagctccaaagg
agaattgaaaaggagggtcatcagatagtacccctgctaactgatttgtggaagagaatt
gaaaattctggttatgctactggagctggcagtagtcttttggatataagaaaaatcgat
cagcgtgttgaaagactagagtatgctggagttgtggacctggtagttgatgtgcagttt
atgttgaaaagtgcaatgcagtattattcgtactcgcacgaggttagatctgaagcgagg
aaagtacatgatctcttttttgatatattgaaaattgcattcccagaggcagattttcga
gaggccagaaatgcaatctctttttctggccagggatccatatccacagctgcatcccca
aggctggtggctgttgggcaaagcaagaaacacaagttgattaatgaggtagagcctgac
atggggaatccccagaagcccatggtcaggatgcacatgccccagaaggatttgaggtta
gggagtggaaatatcactggccgggatcaatgccagcaggatgattcttcacggctcact
catccaggagagctggttatctgcaagaaaaagaggaaagagagggaaaaaacactggtg
aagtctaggagtggatcaactgggcctgtctcacctcccagtgtgagtcgtaatatgaga
agtccagggtcaggctccgtatccagggatgtgagactgagtcatcaagccaccgagcaa
ggatgggctaaccagcctgctcagtcagcaaatggtcctggtgggaccgttgggtgggca
aatcctgtaaaaaggttgaggacggatgcaggtaaaaggaggccaagccatttatga
DBGET
integrated database retrieval system
