Tripterygium wilfordii (thunder duke vine): 119984430
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Entry
119984430 CDS
T07256
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119984430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119984430
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119984430
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
Baculo_PEP_C
ATG17_like
FapA
COG3_N
Motif
Other DBs
NCBI-GeneID:
119984430
NCBI-ProteinID:
XP_038684298
LinkDB
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Position
18:2079808..2088012
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AA seq
842 aa
AA seq
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MSGFSFGSSASAFGSSQSSSSSPFAPGSTASTFGTSTGFSLESSAVNPSSASSSASSSFP
FSLNTASSLSSSPFSSITNPSSASSAAPSFGFGQPGASSSSSSSFSASPFSFGTAAGTGA
SPGPSLFGASFTAASGSAPSIFGAASSASTSSSPLFGVAASSGSSLFGATTPASGPASSS
SLFGVSSAAASSGSPLFGSSAPALFGASTSTASSAPSFGASSPAASSAPAIGTPSLAASS
GSSFFGTPSAAASSGSTLFGAPSSSASSGSTLFGAPSSSASSGSTLFGAPSSAASSGSTL
FGAPSSAASSGSTLFGAPSSAASSGSTLFGAPSSAASSGSALFGTPSSAASSGSALFGRP
SSAASSGSSIFGTSSTTATSTLSLFGASSAPSSSTASAIPAFGASSSTIASPSFQNIASS
SSSLNTSSALPISAAASGFSFAKSTPSSISTAVSAAAPSLTSSSSSSSGFSFGTPASSST
QSFSGFGNAGSSTAAAKPDALSFGTSSASLFSAVTTTVALTPAASSTTLTSSAATSGLAL
PAFGVSSSSSATTASSVAAPASAAAASGSFTGFQLSTKTSSAALSSQAQLTSASPVFAAT
TSTFGTTAAQTSSSLVVASSSGTSASVGAVASTAPKLPSEITGKTVEEIIKEWNAELQER
TGKFRKQAAAIAEWDKRILQNRDVLLRLEIEVAKVVETQANLERQLELIETHQQEVDKAL
QSMEEEAEHIFKDEQGLLLDDEAASTRDAMYEQAEFIERDLENMTEQIKSIIETLNANQG
GEFDTIDGLTPLDVVVRILNNQLSSLMWIDEKAEEFSARIQKLASQGLAANRELMSQKFW
LS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggattctcattcggatcatcggcatctgcctttggatcctctcagtcctcgtcg
tcatctccctttgcacccggatccactgcatctacttttggaacctcgaccggattctca
ttagaatcatccgcagtaaaccctagctccgcctcatcttccgcatcctcctctttcccc
ttctctttgaacaccgcctcctctttgtcttcttcacctttctcttcaataaccaaccct
agttctgcttcgtctgcggctccctcgttcggattcggacaacctggcgcctcctcttcg
tcatcgtcgtcattttccgcttctcctttctcatttggtactgccgcaggtaccggagct
agccccggtccatctctgtttggggcgtccttcaccgctgcatctggctctgctccatcc
atctttggggcagcttcttcggcttcaacttcgagttcgcccctttttggagtggctgcg
agttccggatcttcattgtttggggctactacacctgcttcaggaccggcttccagttct
tcattgtttggggtgagttctgcagctgctagttcgggttcgcccctctttgggagttct
gctccggccttatttggggcaagtacatcaactgcaagttccgctccctcgtttggagcg
tcttccccagcggcaagttctgcgccagcaattgggactccttcattggcggcaagctca
ggctcaagcttttttggtacaccttcagccgctgcaagctctggctcaaccttatttggt
gcaccttcatcctcggcaagctctggttcaaccttatttggtgcaccttcatcctcggca
agctctggttcaaccttgtttggtgcaccttcatccgctgcaagctctggttcaaccttg
tttggtgcgccttcgtccgcggcaagctctggttcaaccttgtttggtgcaccttcgtcc
gcggcaagctctggttcaaccttgtttggtgcaccttcgtccgcagcaagctctggttca
gcattgtttggtacaccttcgtcggcagcaagttctggttcagctttgtttggtagacct
tcatctgcggcaagctctggttcatctatctttgggacttcttcaaccacggcaacttcc
acactatccctgtttggggcatcaagcgctccaagctcttctactgcctctgctatccca
gcatttggcgcttcatcttcaacaatagcatctccttcatttcaaaacattgcctcttca
agttcatctttaaatacaagctctgctctgcctatctctgcagctgcctctggattttct
tttgctaagagtactccaagttctatatcaacagctgtgtcagcagctgctccttctctg
acatcatcttcttccagcagttcaggcttctcgtttggaacaccagcttcctcatctact
caatccttctctggattcggcaatgccggttcaagcacggcagctgcaaaaccagatgct
ctttcttttggaacttcatctgcttcacttttttctgcggtcacaaccactgttgcttta
actcctgctgctagtagcacaactcttacttcctctgctgcaacttcagggctggcacta
cctgcatttggtgtgagttcttcttcttctgctaccactgcttcatctgttgctgctcct
gcaagtgctgctgcagcatctggatctttcacaggttttcagctgtcgacaaaaacatct
tctgcggccttgtcctctcaggcacagttaacatctgcttcccctgtgtttgcagcgaca
acttccactttcggtactactgcagctcagacatcatcatctcttgtagttgcttccagc
agcgggacaagtgcaagtgtcggtgccgtggcatctactgcaccaaaattaccatctgag
attactggaaagactgttgaggagatcatcaaggaatggaatgctgagctacaagagcgt
actgggaaatttaggaagcaggctgctgcaatagctgaatgggacaagaggattttacag
aatcgtgatgttcttctaaggcttgagattgaagtggcaaaagttgtagagacccaagct
aacttggagaggcagttggaactaattgagactcatcagcaagaggttgacaaggccttg
caaagcatggaagaagaagcagaacatatctttaaggatgagcaaggattgcttcttgac
gacgaagctgcttctaccagagatgcgatgtatgagcaggctgagtttatagagagggac
ttggaaaatatgactgaacagatcaaatccattatcgagaccctaaatgctaaccaaggt
ggagaatttgatacaattgatgggttgactccattggatgtggttgtacgaattttaaac
aatcaactaagttctttaatgtggatcgatgagaaggccgaagaattctctgcacgaatt
caaaagcttgcttcccaaggtttggctgcaaatcgtgaattgatgagccagaaattttgg
ttatcttga
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