Tripterygium wilfordii (thunder duke vine): 119984574
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Entry
119984574 CDS
T07256
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119984574
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119984574
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119984574
NCBI-ProteinID:
XP_038684509
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Position
18:complement(544944..549335)
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AA seq
437 aa
AA seq
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MAVSLRWLSPSTMLLLMLLVSVNASAEKEELNTYRLVSSSSFLLLDRSNDALNEHVMDNP
EEVAAMVDMSIRNSTKRRELGFFSCGTGNPIDDCWRCNRQWHLHRKNLANCAIGFGRNAV
GGRDGKYYVVSNPLDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTI
DARGVNVHIANGGCITIQYVTNIIIHGLHIHDCIPTGNAMVRSSPSHYGWRTMADGDGIS
IFGSSHIWVDHNSLANCADGLIDAIMASTAITISNNYFTHHNEVMLLGHSDSYTRDKVMQ
VTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHREMYAIGGSANPTINSQGNRYLAPANP
FAKEVTKRVETNTNLWSHWNWRSEGDLMLNGAYFTPSGAGAAASYARASSLGAQSSSMVG
TLTAGAGALSCSRGSQC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctttgagatggctctcgccatccacaatgctgcttctgatgctgcttgtc
agcgtaaatgcctcagcagagaaggaagagctgaatacttaccggttagtttcttcttct
tcttttcttttacttgacaggtcaaatgatgcattaaatgaacatgtgatggacaatcca
gaggaagttgctgcaatggttgatatgagcatacgcaatagcacaaaaaggagagagctg
ggatttttctcatgtggaacaggcaacccaattgatgattgttggcgatgtaaccgacag
tggcaccttcatcggaagaacctagccaactgtgctattggctttggacgcaatgcagtc
ggtggtcgtgatggcaagtactatgttgtcagtaaccctcttgatgatgaccccgttaac
cctagacccggaacgcttcgccacgccgtcatccaagacaggcctttgtggattgtgttc
aagagggacatggtgatccaacttaaacaggaacttatcatgaacagcttcaagaccatt
gatgctcgtggagtcaatgtgcacattgccaatggcggttgtatcacaatccaatatgtc
acaaatatcattatccatggtctccatattcatgactgtatacccaccgggaatgctatg
gttcgaagctcgccttctcattacgggtggaggacaatggctgatggagatgggatttca
atttttggatcaagtcacatttgggttgatcacaattctcttgctaattgtgctgatgga
cttattgatgctataatggcttcaactgctatcacaatctcaaacaattacttcacccat
cacaatgaggttatgctgttgggtcatagtgactcttatacaagagataaggtcatgcaa
gtgaccatagcctataaccattttggtgagggtcttattcagagaatgccaaggtgtaga
catgggtatttccatgtagtgaacaatgactacacacaccgggaaatgtatgctattggt
ggaagtgctaatcccaccattaatagccagggaaacagatatcttgccccagcaaaccct
tttgccaaggaggtgacaaagagggtggaaactaataccaatttgtggagtcactggaat
tggagatcagagggagatttgatgctcaatggagcctacttcactccatcaggagctgga
gcagctgccagttatgccagggcctcaagcttaggagcccaatcctcttccatggtcggt
actcttactgccggtgccggtgccctttcttgcagcaggggctcgcaatgttaa
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