Tripterygium wilfordii (thunder duke vine): 119984721
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Entry
119984721 CDS
T07256
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
twl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119984721
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119984721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119984721
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119984721
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119984721
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119984721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF4
EIF3I
WD40_like
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
119984721
NCBI-ProteinID:
XP_038684731
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All DBs
Position
18:12426120..12427559
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AA seq
381 aa
AA seq
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MQNQTQQEIGNTGEENEQERARCEWDFELSAAVSSSTTGAVPDVLGVIEVDPSDSIVATG
GIARKIRIYSVNSLLASQSSEETLLLDHATACDYYICTPAKLSSLRWRPGSGGRVIGSGD
YDGVVTEYDLERRAPIFERDEHGGRRVWSVDYSHCEPVVGASGSDDGTMQLWDPRCDGGN
WVATVQPSLSRSPVCCVEFNPFGGALIAVGCADKRAYGYDFRMIREPLIIFDGHLKTVSY
VRFLDMNTMISAGTDGCLKLWDLHDSQVIRTYRGHVNNRRFVGLSVWKNGGLIGCGSESN
QVYVYDKRWGSPIWVHGLEPLAPVMSRTGFDEGGWVSSVCWRQVGENQCTLIAGRSDGLL
QVFMGKRKKSSASDTNTVIRL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccaaacacaacaggaaataggaaatacaggagaagagaatgaacaagagcga
gccagatgtgaatgggatttcgaactctccgccgccgtatcttcaagcactaccggagcc
gtccccgacgtgcttggtgtgatcgaagtcgacccgtcagatagcatcgtcgccaccggc
ggaatcgcgagaaagattagaatttacagtgtaaactctttgttagctagtcaaagtagc
gaagagactcttctgttagaccatgccaccgcatgcgactactacatatgtacaccagcc
aaactcagtagcctccggtggaggcccgggtcgggcggacgagtcataggatccggagac
tacgacggcgtggtcacggagtacgatcttgagcgaagagcacccatttttgaacgcgac
gagcatggcgggcgccgggtttggagcgtggactattctcattgtgaacccgtcgttggt
gcttccgggtcggacgacggaaccatgcaactctgggacccacgttgcgacggtggaaat
tgggtggctacggtgcagcctagcctgtcacgtagtcccgtgtgttgcgttgagtttaat
ccatttggcggggcattgatagcggtcggatgcgcagacaagcgcgcatacggatacgat
ttcaggatgataagggagccgcttataatattcgacgggcacctgaaaacggtgtcgtat
gttcgattccttgatatgaatacaatgatttctgccggaaccgacggttgtttaaagcta
tgggatttacatgattctcaggtgattcgcacttatagagggcacgtgaacaaccggaga
ttcgtggggttatccgtatggaaaaatggtgggctaatcggatgtgggtctgaaagtaat
caagtgtatgtgtatgacaagagatggggttcgcccatatgggttcatgggctcgagcca
ctcgcaccagtaatgtctcgaactgggtttgatgaaggtgggtgggttagtagtgtgtgc
tggagacaagttggtgagaaccagtgtacacttattgcaggtagatcagatgggcttttg
caggtttttatgggcaaaaggaagaagtcatctgcttctgatacaaatacagtaattcgg
ttgtaa
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