Tripterygium wilfordii (thunder duke vine): 119984774
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Entry
119984774 CDS
T07256
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119984774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119984774
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119984774
Hops complex
119984774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
119984774
NCBI-ProteinID:
XP_038684810
LinkDB
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Position
18:82321..89388
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AA seq
847 aa
AA seq
DB search
MANVSVAAEWQLLYNRYYRKPELYPMRWKHVDLSRNKIACASFGGPIAVIRDDSKIVQLY
SESALRKLRIFTSSGVLLAETIWKHPGGRLIGMSWTDDQTLVCIVQDGTVFRYNIHADLI
EPHFSLGKECFEENVVECVFWGDGVVCITGAGKVFCVTDFKNPRPSRLADIPGMGGEEEG
VMHCVVVIEPQYTMSGNVEVLVGMDEGLVMVDEDGVQPVGLGVVEGPLQKIVVSLDGKYL
ASFTHDGKLLVMTTGFSKLFEYECESALPPEQMAWCGLDSVLLYWDDMLLMVGPFGDPVK
YIYDEPMVFIPESDGVRILSNTSMEFLQRVPDSTVSIFKIGSTSPAALLYDALDHFDRRS
AKADENLRLIRNSLPEAVEACVDAAGHEFDISRQRTLLRAASYGQAFCSNFQRDRIQDMC
KTLRVLNAVRSPEIGIALSIQQYKLLTAPVLIGRLINVHQHLLAFRISEFLGMNQEVVIM
HWACSKITASLAIPDATLLEILLDKLKLCKGISYAAVAAHADKSGRRKLAAMLVEHEPRS
SKQVPLLLSIGEEDVALTKATESGDTDLVYLVVFHIWQKRPPLEFFGMIQARSLARDLFI
TYARCYKHEFLKDFFLSTGQIQEVAFLLWKESWEMGKNPMASKGSPLHGPRIKLIEKAQS
LFAETKEHTFESKAAEEHAKLLRIQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMR
VKAEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIDADEKGEALK
YIPKLADPREKAEAYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDR
LSFQGVS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtctcggtggcagcggaatggcaactcctctacaataggtactaccggaag
cccgagctctacccaatgagatggaaacacgtcgacttgagccggaacaagattgcctgc
gctagcttcggaggcccaatcgccgtgatccgtgacgattccaagatcgtccagctctac
tccgaatctgccctccgcaagctcagaattttcacctcctccggcgtccttctcgccgag
accatatggaagcacccgggaggacgcctgataggcatgtcatggacggacgaccagaca
ctcgtctgcatcgtgcaggacggcaccgttttccgctacaacattcatgcggaccttatc
gagccgcacttctctctggggaaggagtgtttcgaggagaatgtggtggaatgcgtgttt
tggggggacggcgtcgtgtgcatcaccggggccgggaaggtcttctgcgtgacggatttt
aagaatcccaggcccagtaggttggcggatattccgggaatgggtggggaggaggaaggg
gtgatgcattgcgtcgtggtgatcgagcctcagtacacgatgtctggaaatgttgaggtg
ttggtggggatggatgaagggttggtaatggtggacgaggacggagtgcagccggtgggg
cttggcgtggtggagggaccgttgcagaagatcgtggtgtctctggatgggaagtattta
gcttcgttcactcatgatgggaagcttttggtgatgactacggggttttcaaagctcttc
gagtacgagtgcgagtcagcccttcctccagagcagatggcttggtgtggattagacagt
gtgctgctttattgggatgatatgctcttgatggtgggtccttttggagatccagtgaaa
tatatttatgatgaaccaatggtgtttatccccgagtctgatggagtgaggatattatca
aacaccagtatggaatttctacaacgtgtacctgattccactgtatctatctttaagatt
gggagcacatctcctgctgcattactttatgatgccttggatcattttgacaggcggagt
gctaaggctgatgaaaatctgagattaatacgcaattccttgcctgaggctgttgaagca
tgtgttgatgctgcaggacatgaatttgacatttcccgtcaaaggacgctattaagagct
gcaagctatggtcaggctttttgcagtaatttccaacgagatcgtattcaagatatgtgt
aaaactttgcgggtcttaaatgctgtgcgcagccctgagattggcattgctcttagcatt
cagcagtataagttgcttacagctccggttctaattggacgtctgattaatgtccaccaa
cacctccttgcattccgaatatcagaattccttggaatgaatcaagaggtggtgataatg
cattgggcttgttcaaagataacagcctcactagcaattcctgatgccactcttcttgaa
attttactcgataagttgaaattatgcaaaggaatatcttatgcagcagttgctgctcat
gcagacaagagtggtcgccggaaattagctgcaatgcttgttgagcatgaaccacgctcc
tccaaacaggttcctcttttattaagcataggggaggaagatgtagctttgacgaaggca
acagaaagtggtgatacggacctcgtatatcttgtcgtctttcacatctggcaaaagagg
ccaccattggagttctttggaatgattcaagccagatcactggcacgtgatttgtttata
acttatgcacggtgttacaagcatgaattcctgaaggatttcttcctatcaactggacaa
attcaagaagttgcttttcttctatggaaagaatcatgggaaatgggaaaaaatccaatg
gcaagcaaaggatctccacttcatggcccacgcataaaacttattgagaaggcccaaagt
ttatttgcagaaaccaaggaacatacttttgaatcaaaggctgctgaagagcatgcaaag
ttgttgagaattcaacatgagctagaagtgtctacgaagcaggctattttcgttgattca
agtatcagtgacacgattcggacgtgtattgtactgggaaatcatcgtgctgcaatgaga
gtgaaagcagaatttaaggtttctgagaagagatggtattggcttaaagtttttgctttg
gctacaatcagagattgggatgcactggaaaagttttccaaggagaaaagacctccaatt
ggttacaggccttttgtggaagcatgcattgatgcggatgagaaaggtgaagctctgaag
tatatcccaaaacttgcagatccccgtgagaaagctgaggcttatgctcggattggcatg
gcgaaggaagctgcagacgctgcttctcaggcaaaagatggtgaattgcttggtcgtttg
aaattgacttttgcgcaaaatgcagctgcttcatcaatttttgacactcttcgtgaccga
ctttcctttcaaggtgtttcataa
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