Tripterygium wilfordii (thunder duke vine): 119985019
Help
Entry
119985019 CDS
T07256
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119985019
Enzymes [BR:
twl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
119985019
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119985019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
119985019
NCBI-ProteinID:
XP_038685097
LinkDB
All DBs
Position
19:392476..397576
Genome browser
AA seq
665 aa
AA seq
DB search
MGPATALDKKKNKGPKSQKPLEQPKKKQKEDLFIAGKRPKKGEVFDSFDNPNEEVEEEEE
QELQFDVAKKKGYESKKNSKQLKGKFFAEKDEDSIEEVDDEEEEEELGESGSGSESFSGE
DDDDPLADDFLQGGSDEEEEEDHSESDSDESDADIEKKARAIDDERARQEKEAEEEMQLN
IKEESDEFRLPTKEELEEEAHQPPDLQKLKRRIAEIIRVLSSFKELKQEGKTRKDYVEQL
KVDLMSYYGYNDFLIGVLIDMFPVVELKELIEAFEQPRPISLRTNTLKTRRRDLAGVLLN
RGVNLDPLNKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVD
VAAAPGGKTTYIAALMKNSGLIYANEMKAPRLKSLTANLHRMGVTNTIVCNYDGRELPKV
LGQNTVDRVLLDAPCSGTGVISKDESVKNSKSLEDIQKCALLQKQLILAAIDMVDANSKS
GGYIVYSTCSIMIPENEAVIDYALKRRNVKLVPCGLDFGRPGFVRFREHRFHPSLEKTRR
FYPHVHNLDGFFVAKLKKMSNAKPTSVPSDPVESVEEAPELNETKSEKKTVENLPKKGAA
KAKKVLTDTVTANGNGNGESPSKNKKGMKRKFPPREEISKARENKRQALRENKRMATGKK
SRKRE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggggccagctactgcgcttgataagaagaagaataagggtccgaaatcacagaagcca
ctggagcaacctaagaagaaacagaaggaggatttattcatcgccgggaaacgacccaag
aaaggagaggtttttgatagttttgacaacccaaatgaagaggtagaagaagaagaagag
caggagcttcaatttgatgttgcaaagaagaagggttatgagtcgaagaagaatagtaag
caactgaaagggaagttttttgctgagaaagatgaggattccatcgaagaagtagatgat
gaggaggaagaagaggaacttggagagtcaggttctgggtcagagtcgttttctggggag
gatgatgatgatcccttggcagatgatttcctacaaggaggaagtgatgaagaagaagag
gaggaccattcggaatctgattcagatgaatctgacgctgatattgagaagaaagcaaga
gctattgatgatgaaagggcgaggcaggaaaaggaggcagaggaggaaatgcagcttaac
attaaagaggaatctgatgagttcagattgccaactaaagaggagcttgaagaagaggca
caccaaccacctgatcttcagaaactcaaaaggaggatagctgaaattataagggtgctt
tcaagttttaaggagttgaagcaagagggaaaaacaaggaaggattacgtagagcagctt
aaagtggatttaatgtcatactatggctacaacgacttcctaattggagttttgattgat
atgtttcctgttgttgagcttaaagaactcatagaagcttttgaacaacctcgacctata
tctttgcgaactaacaccttaaagacacgaagacgggatttggctggagttctcttgaac
agaggagtcaacttagatccattgaacaagtggtcaaaggttggactggttgtgtatgac
tcgcaagtgccaattggtgcaactccggaatatatggctggcttctatatgttgcaaagt
gcaagctcctttttgccagtgatggccctggctcctcaggaaaaggaacgaattgttgat
gtggcggctgcacctggtggtaaaacaacttatatcgcagctctaatgaaaaatagtgga
ttaatttatgcaaatgagatgaaggcccctagactgaagtcactaactgcaaatttgcat
cgaatgggggtgacaaacactatagtttgtaactacgatgggagggagctacccaaggtt
ttgggacaaaacacagttgacagggttttattggatgccccttgcagtggcactggggtc
atttctaaagatgagtcagttaaaaattcgaaaagtttggaagatatacagaaatgtgcg
cttttgcagaagcaattgatccttgctgcaattgacatggtcgatgccaattcaaaatct
gggggatacatagtgtactcaacatgctccataatgattccggagaatgaagcagtcatt
gactacgctttaaaaaggaggaatgtgaaacttgtgccatgtggccttgactttggacgt
ccagggtttgtccgattcagggaacaccgctttcacccatcattagaaaagacaaggcga
ttctaccctcatgtccacaacctggatggattttttgtggcaaagttgaagaaaatgagc
aatgcaaaaccaacttcagttccttctgatcctgtagaatctgtggaggaagctcccgag
ctaaatgagaccaagagtgaaaagaaaactgttgagaatttgccaaaaaaaggtgctgca
aaagcaaaaaaggtcttaactgatactgttactgccaatgggaatgggaatggggagtcc
ccttccaaaaacaagaagggaatgaaaagaaaattccctcctcgagaggagatctctaaa
gccagagaaaacaagagacaggctttgagggaaaacaaaaggatggcaacaggcaagaag
agtagaaaaagagaatga
DBGET
integrated database retrieval system
