Tripterygium wilfordii (thunder duke vine): 119985056
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Entry
119985056 CDS
T07256
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119985056
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119985056
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119985056
NCBI-ProteinID:
XP_038685146
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Position
19:complement(11884956..11886826)
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AA seq
403 aa
AA seq
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MPSPSLTLLFLLCLLTPSLISSRPLQDPDFVVQEVHRAINDTRRDLGYLSCGTGNPIDDC
WRCDPNWEKNRQRLADCAIGFGKSAVGGRDGQIYVVTDPSDNDAVNPKPGTLRYAVIQDE
PLWIIFARDMTIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK
PGGNAMVRSSPRHYGFRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIEGSTAITIS
NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSADPTINSQGNRFVAPNTQFSKEVTKHEDAPISEWKNWNWRSEGDLLMNGAFF
TPSGAGASSSYAKASSLGARPSSLVATLTGSAGSLNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcccctcgctcactctgctcttcctcctctgcctccttaccccatccctcatt
tcctccagaccactccaggacccagattttgtcgtacaagaagttcacagggcaattaat
gataccaggagggacttgggttatctctcgtgtgggacgggcaatccgatcgacgactgc
tggcgttgcgaccccaattgggagaagaaccgccagcggctagccgattgcgcgattggg
ttcggtaagagcgcagtcggaggacgggatggtcagatttacgttgtcacggaccctagt
gacaatgacgcggtgaaccccaaaccagggaccctaaggtatgctgtgatccaggacgag
ccattatggatcatttttgctcgggacatgaccataaagctaaaggaggaattgatcatg
aattctttcaagacaatcgacggcagaggagccagcgtacacattgccggtggtccatgt
attactatacagtatgtgactaacattattatacatggattgaatattcatgattgtaag
ccaggagggaatgctatggtgcggagctcaccacggcattacgggtttagaaccatatcg
gatggcgacggtgtgtcgatttttggtgggagccacgtgtgggtggaccattgttcattg
tcgaattgcaaggatggactgattgatgccattgaagggtccactgccatcactatttca
aacaattacatgactcaccatgataaagtcatgttgttgggccacagcgattcctacact
caagacaagaacatgcaagttactattgcctttaatcactttggtgaagggctagtccag
agaatgccaagatgtaggcatgggtacttccatgtggtgaacaatgactacacccattgg
gaaatgtatgcaattggagggagtgctgatccaacaattaacagtcaaggcaacagattt
gttgctcctaatactcaattcagtaaagaagtgacaaagcatgaagatgcgccaataagt
gagtggaagaattggaactggaggtcagaaggagacttgttgatgaatggtgcattcttt
acaccatctggtgcaggggcttcttcaagctatgccaaagcttctagcttgggtgcaaga
ccttcttcacttgttgctactctcactggcagtgcaggatcacttaattgcagaaagggt
tcccgctgctga
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