Tripterygium wilfordii (thunder duke vine): 119985128
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Entry
119985128 CDS
T07256
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119985128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twl02000
]
119985128
Transporters [BR:
twl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119985128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND3
Mg_chelatase
SH3_Rv0428c
Motif
Other DBs
NCBI-GeneID:
119985128
NCBI-ProteinID:
XP_038685237
LinkDB
All DBs
Position
3:8929279..8972257
Genome browser
AA seq
1888 aa
AA seq
DB search
MGTARRQLKAMLRKNWLLKIRHPFVTLAEILLPTIVMLLLIAVRTQVDTQIHPAQPYIQK
DKFVEVGKGISPNFQQVLELLLAKREYLAFAPDTEETRMMIDLMSIKFPLLKRVAKVYED
ELELETYISSNLYSTYNEAKNCSYPKIKGAVVFHGQGPQLFDYSIRLNHTWAFSGFPNVK
SIMAVNGPFVKDLELGFNIIPMLQYSFSGFLTLQQVVDSFIIYVAQQTESNIAIEYIKSP
SSDSFSRQSSLKLPWTQYSPANIRIAPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISR
LISYSVFEKEQKIREGLCMMGLKEGIFHLSWFITYALQFALSAGIITACTMGSLFKYSDK
SVVFVYFFLFGLSAIMLSFLVSTFFTRAKTAVAVGTLSFLGAFFPYYTVNDEAVPMILKV
VASLLSPTAFALGSINFADYERAHIGLRWSNIWRADSGVNFLVCLLMMLLDTLLYCLIGL
YLDKVLPRENGVSYHWNFIFQNCFWRKKKKIKHQSSSLEGKVNDNFSKNKSNFYGGDTVE
PIVEAISLDMKQQELDGRCIQMRNLHKVYSTRRGNSCAVNSLQLTLYENQILALLGHNGA
GKSTTISMLVGLLPPTSGDALVFGKNIVTDMDEIRKGLGVCPQNDILFPELTVREHLEIF
AVLKGVEEDVLESVVIDMVDEVGLADKVNTVVGALSGGMKRKLSLGIALIGNSKVIILDE
PTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL
KHQYGVGYTLTLVKSSPNASIAADIVYRHIPLATCVSEVGTEISFKLPLGSSAAFENMFR
EIESCMRSPICVPERMGREDTNHRGIESYGISVTTLEEVFLRVAGCDYYETECAGQRNDF
LSSDSVVSSASYDQAPKKNFHVKIFGDYLKLIGIVFATVGRACSLIFSAVLSFFKFLTMQ
CCSCCIISRSTFWQHCKALFIKRAVSAQRDRKTIVFQLLIPVLFLFLGLLLLKLKPHPNE
PSITLTTSYFNPLISGGGGGPIPFNLSRPIAKEVADYIEGGWIQNFKQSGYRFPNSKGAL
ADAIEAAGPTLGPDLLSMSEFLMSSFNESYQSRYGAIVMDDQNVDGSLGYTVLHNSSCQH
AAPTYINLMNSAILRLATRNRNMTIRTRNHPLPMTESQRLQRRDLDAFSAAVVVNIAFSF
IPASFAVALVKEREVKAKHQQLLSGVSIFSYWASTYAWDFVSFLFPTSFAVLLFKIFGLD
QFVGSDCFWPTILLFLEYGLAIASSTYCLTFFFSDHTVAQNVVLLFHIFSGLVLMVISFI
MGLIETTARANDVLKNFFRLSPGFCFADGLASLALLRQGMKDKSSNEVFDWNATGASICY
LGLESIGFFLLTLVLELFPSHKLAPFSLKEWCSNVLNLLRDTSSITEPLLKLSSENAALD
LDEDIDVRNERNRVLSGSIDSAIIYLRNLRKVFPGGNNTGAKVAVDSLTFSVQAGECFGF
LGTNGAGKTTTLSMLSGEESPSDGNAFIFGKDIRSNPRAVRRHIGYCPQFDALLEFLTVK
EHLELYARVKSVPGYRVDSVVKEKLKEFDLLKHANKPSYTLSGGNKRKLSVAIAMIGDPP
IVILDEPSTGMDPIGKRFIWEVISRLSIRQGKTAVILTTHSMNEAQALCTRIGIMVGGHL
RCIGSPQHLKTRFANHLELEVKPTEVSSVDLENLCQIIQERLFHFPPHSRSLLDDLEVCI
GGIDSITSEGASAAEIRLSQEMIIIIGRWLGNEERVKRLLSPSHVSDGFLFEQLFRDGGI
PLPIFSEWWLSKEKFLTIDSFVVSSFPGTTFQGCNGLSVKYQLPYGEGLSLADVFGHLER
NRSQLGIAEYSISQATLETIFNHFAANP
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggggactgcacggaggcagttgaaagctatgcttcggaagaactggcttctcaaaatt
cgtcatccttttgttactctcgccgagattttgcttcctacaattgtaatgttgttgttg
atagctgttaggacacaagttgatacacaaattcacccagctcaaccgtatatacaaaaa
gataagtttgtggaagtgggaaaaggcatatctcctaattttcaacaagttttagaatta
ttgttggccaagagagagtatttggcatttgctcctgatacagaagaaacacggatgatg
atcgatttgatgtctataaaatttcctttactgaagcgagttgctaaggtctatgaagat
gaacttgagcttgaaacctacatctcctccaatctctacagtacttataatgaagccaag
aactgttcttatccaaaaatcaagggagcagtagtatttcatggacaaggtcctcagtta
tttgattatagtattcgcctcaaccacacttgggctttttctggatttcctaatgttaag
tcaatcatggccgtgaatggaccttttgtcaaagacttggaattgggcttcaatattata
ccgatgttgcagtacagcttcagcggatttttgactcttcagcaggtggtggattcgttc
ataatatatgttgctcagcaaactgaaagcaacattgctattgaatacataaaaagcccc
tcatcagattcattcagcaggcaatcttccctcaagcttccatggacacaatatagccct
gcaaatatcagaatagctcctttccctactcgtgaatacactgatgatgagtttcagtcc
atcattaaaagtgtcatgggagtattgtatctcttaggatttctctacccgatatcccgc
ctaatcagctattcagtgtttgagaaggagcagaagataagagaaggtctttgcatgatg
ggcttgaaagaggggatatttcatctttcttggtttattacctatgctttgcagtttgca
ttatcagctggtatcatcacagcttgtaccatgggtagcctttttaagtatagtgataag
tccgtggtgttcgtgtatttctttttgtttggactcagcgcaatcatgctgtcatttctg
gtatctacattcttcacacgagcaaaaactgctgttgcagttggaaccctttcgtttctt
ggggccttctttccttattacactgtcaacgacgaagctgtccccatgatattaaaggtt
gttgcttctttgctgtcaccaacagcatttgctctaggatcgattaactttgccgattat
gagcgtgctcacattggacttcgttggagcaacatatggcgagctgattccggtgtaaat
tttttggtctgtcttctcatgatgttgcttgacacactattgtactgtctcattggtctc
tacctagataaggtccttcccagggaaaatggagtaagctatcattggaacttcatattc
caaaattgcttctggaggaaaaaaaagaagatcaaacatcaaagttcttctttggagggt
aaagttaatgataatttttccaagaacaagtcgaatttttatggaggagatactgttgaa
cctatcgtggaagcaattagtttggacatgaagcaacaagagcttgacggcagatgtatc
cagatgaggaacctgcataaggtgtactctaccagaagagggaatagttgtgctgttaac
tctttacagctgaccttgtatgaaaaccagattcttgctcttctaggacacaatggagct
ggtaaaagtacaacaatttcaatgcttgtgggccttcttcctcctacatcaggggatgct
ctggtgtttggcaagaatattgttacagatatggatgagatacggaagggacttggtgtt
tgccctcaaaatgatatcctttttccggaattgacggtgagagagcatttggagattttt
gctgtgttgaaaggtgtggaggaggatgttcttgagagcgttgtgattgatatggttgat
gaggttggtttagctgataaagtaaacactgttgttggggctctttctggcggcatgaaa
aggaaattgtctcttgggattgcacttataggaaatagtaaggttataattcttgatgaa
cctacaagtggaatggatccatactcgatgcgcttgacatggcagctaattaaaaagatt
aaaaagggaaggatcatattactgacaacacactcgatggatgaagcagaagaacttgga
gatcggatagctatcatggctaatggctctttgaaatgctgtggaagttcgcttttcttg
aagcatcagtatggggttggttatactcttacattagtcaagtcttcacctaatgcctct
attgctgcggacatcgtttaccgtcacattccgttggcaacgtgtgtaagtgaggttgga
actgaaatttcgttcaagcttcctctaggatcatcagcagctttcgaaaacatgtttaga
gaaattgaaagttgcatgagatcacctatttgcgttccagaaagaatgggtagggaagat
acgaatcatcgtggcattgaaagttatggtatatctgtcacaacattggaggaggtattt
ctgagagttgcaggatgtgactactatgaaactgaatgcgctggtcagagaaatgatttt
ctttcttctgattcagtggtttcttcagcttcatatgatcaagcacccaaaaaaaatttc
cacgtaaagatttttggagattatttaaagctcattggcattgtatttgccacagtaggg
agagcctgcagcttgattttctctgcagttttaagttttttcaagtttctaacaatgcag
tgctgtagctgttgtatcatttcaaggtcaacgttttggcaacactgcaaagcattattt
ataaagagggcagtatctgctcagagagaccgcaaaacaattgttttccagcttctgata
cctgttctcttcttatttcttggacttcttcttctcaagcttaagccacatcctaatgag
ccatctatcaccttgacaacttcatatttcaatcctctaataagtggtggtggtggtggt
cccattcctttcaatctttcccgtcccattgccaaagaggttgcagactatatagaagga
ggttggattcaaaactttaaacagagcggatatagattccctaattcaaaaggtgcatta
gctgatgcaatcgaagcagcaggaccaaccttgggaccagatttactttcaatgagtgaa
ttcttgatgtctagctttaatgaatcctaccagtcaaggtatggagcaattgttatggac
gaccagaatgttgatggaagtttagggtacactgtactgcataacagttcttgccagcat
gctgctccaacctatatcaatttaatgaattctgcaattcttagattggcaactcgtaat
agaaatatgacgattcgaacgcgcaatcatcctctgccaatgacagaaagccagcggttg
caacgtcgtgacctggatgcattttctgctgcagttgttgttaatattgccttctccttc
attcctgcttcatttgctgttgcccttgtaaaggaacgtgaagtaaaggctaaacaccag
cagctacttagtggagtttctatattctcatattgggcttctacatatgcttgggatttc
gtcagcttcctttttcctacatcttttgctgtacttctttttaaaatttttggtttggat
cagtttgttggaagtgattgtttctggccaacaattctattgtttttggagtatggactg
gcaattgcatcatcaacatattgccttacattcttcttttctgaccacacagtagctcag
aatgtggttctcttgttccacattttctctggacttgttcttatggttatctcattcatc
atgggccttatagagacgacagcaagggcaaatgacgtcctcaagaacttcttcagatta
tcaccgggcttttgttttgccgacggacttgcttcactggctcttctacggcaaggaatg
aaagataaatcaagtaatgaggtttttgactggaatgctacaggggcttcaatttgctac
cttggccttgagagcatcggtttcttcctcttaacacttgtgcttgaactctttccttct
cacaaactagctccattctcacttaaggagtggtgtagtaatgttttgaacctacttcgt
gacacatctagcatcacagaacccctattaaagctttcttctgaaaatgctgctcttgat
cttgatgaagacatagatgttcggaatgaaagaaacagagttctttcaggttccattgat
agcgccatcatctatttgcgcaatcttcgtaaggtttttcctggaggaaataacactggg
gcaaaagttgctgtcgattcgttgaccttctcagttcaggcaggagaatgttttggcttt
ttaggaacaaatggcgctggaaagacaaccactctatctatgttatcgggagaagaatca
ccaagtgatggaaatgcgtttatctttggcaaggatattagatcaaatcccagggcggtt
cgtcggcatattggttattgcccccaattcgatgctttgttggagtttttaactgtcaaa
gagcatcttgagctttacgctagagtcaaaagtgttccaggttacagggtagacagtgtt
gttaaggagaagttaaaggagttcgacttgttgaagcatgctaacaagccatcatataca
ctaagtgggggaaacaagcgcaagttgtctgttgcaattgcaatgattggtgatcctcct
atagtcattcttgatgagccatcaactggtatggatcctataggaaaacgattcatatgg
gaagtgatttcccgtttatcaattagacaaggaaagacagcagttattctaacaacacac
agcatgaatgaagctcaggcactgtgcacacgaattggaataatggttggaggccattta
agatgcatcggaagtcctcagcatttaaaaacacgctttgcgaatcatcttgagctggag
gtaaaaccaactgaagttagctctgtagatctagaaaacctgtgtcaaatcattcaagag
aggctttttcactttccccctcattcaagaagcttgctcgacgatcttgaagtttgcatt
gggggaattgattccattacttctgagggtgcatcagcagccgagatcaggttgtctcaa
gaaatgatcattattattggtcgatggcttggcaatgaagagagagtaaaaagacttcta
tctccaagtcacgtatccgacggatttctgtttgaacagttgtttcgagatggtgggata
cctctgccaatattttcagaatggtggttatccaaagagaaatttttgaccattgattca
tttgttgtatcttcatttcccggcacaacattccaagggtgcaatgggttgagtgtcaaa
tatcagttgccctacggagaaggcctctctctcgcagatgtctttggacaccttgaacga
aacaggagtcaactgggaatagcagaatacagtattagccaggcaaccctggaaaccata
tttaaccatttcgcggccaatccgtga
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