Tripterygium wilfordii (thunder duke vine): 119985302
Help
Entry
119985302 CDS
T07256
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119985302
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119985302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
119985302
NCBI-ProteinID:
XP_038685488
LinkDB
All DBs
Position
19:464691..472598
Genome browser
AA seq
419 aa
AA seq
DB search
MFSFCSPAKNPNPSTIFLKMPSFSFLYLLMLMHSTFATSMRPLMQISRAIEWSSERRHLE
SETGSCRTGNLIDDCWRCDSEWETNRKMLADCAFGFGRNAVGGRDGKLYVVTDSDNDDPL
DPIPGTLRYAAIQEEPLWIIFDHDMIINLKEELVMNSYKTIDGRGFNIQISKGPCIAIYN
VSNIIIHNIYIHDCVPGGIEVMKNSPQHSTLRGYSDGDGISIYGSRDVWIDHCTLASCHD
GLIDVVYGSTSITISNNYMFHHNEVMLMGNNDDFLADKNMQVTIAFNFFGEGLVQRMPRC
RHGYFHIVNNIYTSWEMYAIGGSANPTINSQGNVFIASNNSFTKEVTKREISSDNDEWKR
WNWRSDGDLMLNGAFFTPSGQESPASYIKASSMVARPALLLTTISPSAGALNCQKGFKC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttctcattttgtagtccagcaaaaaatcctaatccttcaaccattttcttaaagatg
ccaagcttcagtttcttatacctgctcatgctgatgcattccacttttgcaacctctatg
cgtccattgatgcaaatatcaagagcaattgaatggagttcagagagaaggcacctggaa
tcagagacagggtcatgtagaaccggcaatcttattgatgactgctggagatgcgactca
gaatgggaaaccaaccggaaaatgctagcagattgcgcatttgggtttggacgcaatgct
gtgggaggtcgagatggaaaactttatgtagtcacagattctgataatgatgatccccta
gatccaattccaggcacgctccggtacgcagctatccaagaagaacctctgtggatcatt
tttgaccatgacatgatcattaacttaaaggaagaactagttatgaactcatacaagacc
atagacggaagagggtttaacatccagatatcaaaagggccatgtatagcaatttataat
gtcagtaacataatcatacataacatctacatacatgactgtgtaccaggtggaattgaa
gtaatgaagaactcgccacagcattccaccttgagaggctactcagatggtgatggaata
tcaatttatggatcaagggatgtatggattgatcattgtactctggctagctgccatgat
ggacttattgatgtcgtatatggctcaacatcgataacaatctcaaacaactatatgttt
catcacaatgaggtaatgcttatgggtaacaatgatgacttccttgctgacaagaatatg
caagttacgattgccttcaatttctttggggaaggcctggttcaaagaatgcctaggtgc
agacatggatattttcatattgtaaataacatatatacaagctgggagatgtatgcaatt
ggcggaagtgccaatccaacaatcaatagccaagggaatgtctttattgcatcaaataac
agcttcacaaaggaggtaactaagcgtgaaatctcgtcagacaatgatgagtggaaaagg
tggaattggagatcagatggagatctgatgctcaatggtgctttcttcacaccttccgga
caagagagccctgcaagctacattaaagcatcaagcatggtagcaagaccagctttgcta
cttacaactatttctccatctgcaggagctctaaactgtcagaaaggtttcaaatgctga
DBGET
integrated database retrieval system
