KEGG   Tripterygium wilfordii (thunder duke vine): 119985693
Entry
119985693         CDS       T07256                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119985693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:twl04121]
    119985693
   03036 Chromosome and associated proteins [BR:twl03036]
    119985693
Ubiquitin system [BR:twl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119985693
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     119985693
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40 WD40_Gbeta WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 MIOS_WD40 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 119985693
NCBI-ProteinID: XP_038685940
LinkDB
Position
19:complement(14717978..14720205)
AA seq 341 aa
MDNSSQDSFLRLGNCVTYDSPHPLYSLALSSTPSRIQPHHQTVAVGSFIEDFNNRVDILS
FDPETLSLKPNPSLSFEHPYPPTKLMFHPSSLRKSASDLLASSGDFLRLWEIRDTSIEPL
SVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDNTCTIWDIEKGVVETQLIAHDKEVYD
IAWGDARVFASVSADGSVRIFDLRDKEHSTIVYESPQPDTPLLRLAWNKQDLRYMATILM
DSNKVVILDIRSPTMPVAELERHRACVNAIAWAPQSCSHICSVGDDAQALIWELPTVAGP
NGIDPSLMCSAGSGINQLQWSAAQPDWIAIAFSNKMQFLKV
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggacaactcgagccaagactccttccttagattgggaaactgtgtcacctatgattcc
ccccatcctctttattccttggccttgtcctccaccccctcccgcatccaaccccatcac
caaactgtcgccgtcggcagcttcatcgaggacttcaacaatcgtgtcgacatcctctcc
ttcgatcccgaaaccctctctctcaagcccaacccttctctctcattcgaacatccttat
ccacctaccaaactcatgttccacccctcttccctccgcaaatccgcctccgacctcctc
gcctcctccggtgacttcctccgtctctgggagatccgagacacttctattgaacccctc
tctgttcttaacaactccaagaccagcgaattttgtgctcctctcacatccttcgactgg
aacgaggttgagcccaagcgaattgggacttccagcatcgacaatacctgcaccatctgg
gacatcgaaaagggtgttgttgaaacccagttaattgcccacgataaggaagtgtacgat
attgcctggggggacgcaagggttttcgcatctgtttccgccgatgggtccgtgaggata
ttcgatttgagggataaggagcactctaccatagtctacgagagccctcaaccggatacg
cctttgctcagattggcttggaacaagcaggatttgaggtacatggccacgattctaatg
gatagcaataaagttgtgatcttggatatcagatcacctactatgcccgtggcggaattg
gagaggcacagagcctgcgttaatgccattgcttgggctccgcagagttgcagtcatata
tgttcggttggggatgacgcgcaggccctcatttgggaattgcccacggtggctgggcca
aatgggatcgatccctcattgatgtgctctgccgggtctggaattaaccagctgcagtgg
tcggctgctcaaccggactggattgccattgctttctctaataaaatgcagtttctgaaa
gtttaa

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