Tripterygium wilfordii (thunder duke vine): 119985717
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Entry
119985717 CDS
T07256
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119985717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119985717
Spliceosome [BR:
twl03041
]
Common components
Common spliceosomal components
SR proteins
119985717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
SET_assoc
DUF2129
SelO
Motif
Other DBs
NCBI-GeneID:
119985717
NCBI-ProteinID:
XP_038685994
LinkDB
All DBs
Position
19:complement(13420132..13424448)
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AA seq
384 aa
AA seq
DB search
MLRPIFCGNFEYDARQSDLERLFRRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRTD
FGRKGRRLRVEWTKQERGVRRPESSKRSSTSSKPSKTLFVINFDPYNTRTKDLERHFEPY
GTIASVRIRRNFAFVQFESLEDATKALEATNMSKLMDRVISVEFAIRDDDERKYSPDRSR
DRSPDRRNYDRRRSPGPYRRDRGSPDYGQGSSPNPYRKERVSPDYGRGRSSSPYKRDRTS
PDNGRGSSRSPYRREKPGTDRVRGRSRSPYRRVRASPDNGRDPSQSPYRKEKSSPENGRG
PGNSPYRRERDNSKNGRDNSISPYSRDGGSPDNGRGPSPISMPEPRDSPNNFGGAESPMP
ERYPVHLQGRNDFVTDSHSPPDDE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggccaatcttctgtgggaactttgagtatgatgctaggcaatctgatctggaa
cgtctgtttagaagatatggacgagttgaaagggtggatatgaagtcaggttttgctttt
atctacatggaagatgagagagatgctgaggatgcaattcgaggacttgatcgaacagac
tttggtcgaaagggtcgcaggctgcgtgttgaatggactaagcaagaacgtggtgtaagg
aggcctgagagctcaaaaagatcttcgactagttctaaaccttcaaagaccttgtttgtt
attaattttgatccgtataatacgaggactaaagatttggagaggcattttgagccatat
gggacaatagcgagcgtaaggatcagaagaaattttgcatttgttcagtttgagtcacta
gaggatgccacaaaggccttggaagctacaaatatgagcaagctaatggaccgagttatt
tcggtggagtttgcaattcgggatgatgatgaacgtaaatacagccctgacagaagccgt
gatagatccccggacaggagaaattatgatagaaggcgctcaccaggtccctatcgaaga
gacaggggtagccctgattatggccaaggctctagccccaatccttacaggaaagagagg
gtgagccctgattatggtcgtggtcgcagctctagtccctacaaaagagataggacaagc
cctgataatggtcgtggttcaagtcgtagtccttacagaagagagaagcctggcacagat
cgtgtgcgtggccgcagtcgtagtccttaccgcagggtgagggctagtcctgacaatggt
cgtgatcccagccagagtccttatcgcaaagagaagtccagccctgaaaatggtcgtggc
cctggcaatagtccttatagaagggagagggacaactctaagaatggtcgtgacaacagc
attagcccgtattctagagatggaggttcccctgataatggtcgtggacccagtccaatt
tcaatgcctgagcctagggacagccccaacaactttggtggagctgaaagccccatgcct
gagagatatcccgttcacctccaggggaggaatgatttcgtgactgatagtcactcaccc
ccagacgatgaatga
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