Tripterygium wilfordii (thunder duke vine): 119985758
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Entry
119985758 CDS
T07256
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119985758
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119985758
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
119985758
NCBI-ProteinID:
XP_038686068
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Position
3:complement(10529131..10532294)
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AA seq
480 aa
AA seq
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MSQWTCIVLISLLSSFSSLGRAMFNRTALIPHPNPEEVAQEVQRRVNASVSRRQTLQLTQ
DDQSNCLTGNPIDDCWKCDPDWSNNRQGLADCAIGFGQYAMGGKNGEYYVVTDSSDNDAV
TPKPGTLRYAVIQPEPLWIVFPTNMHIKLSQELIFNSYKTLDGRGANVHITGGGCVTLQY
ISNIIIHNIHIHHCVQSGEANVRSSPTHFGWRTESDGDGISIFGSKDIWIDHCSLSHCKD
GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDEYKPDSGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSGSPTINSQGNRYTAPFDHNAKEVTKRVETGEGEWRDW
NWRSEGDIMVNGAFFVASGQGVEVKYEKAYSVEPKSAVLIDHLVMHAGVLGVGGRDNNLG
KWGTGPNGGEAGLGTDDDYTDDYSGTGRNNMNRYDAALSSIFIPMTCLLISFTLPLTSLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatggacctgcattgtcttgatttctcttctgagctcattttcctcacttgga
agagcaatgtttaaccgtactgctctcattcctcatccgaacccggaagaagtagcccaa
gaagttcagaggagagtaaatgcttctgtttctcgaagacagaccctacaactaacccaa
gacgaccaatctaattgccttaccgggaacccaattgacgattgttggaaatgtgaccca
gattggtccaacaaccgtcaagggctagccgattgtgcaattgggtttggacagtatgcg
atgggcggcaagaacggtgaatactatgttgtcacagactcgtccgataatgatgcggtc
actcctaaaccgggcacattgcgttatgcggtgatacagcctgagcctttgtggattgtt
ttccctactaatatgcacatcaagctctctcaagagctcatttttaatagctacaagacc
cttgatggtcgtggggctaatgtgcacattactggtggtgggtgcgtcactttgcagtat
ataagcaatatcatcatacacaacatccacattcaccattgtgtgcagtcaggagaggct
aatgtgcggtcgagcccaacccacttcggatggcgcactgaatcagacggtgatgggatc
tcaatctttgggtcgaaagacatatggatagaccactgttccctctcacactgcaaggac
ggcctgattgatgctgtgatgggttccacgggaatcacaatttcaaataactttttctca
catcataacgaggtgatgctgttgggtcacagcgatgaatacaagccggactctggtatg
caagtcaccatagcttttaaccactttggggagaagctggtgcagagaatgcccaggtgc
agacgcggctacatacacgtcgtcaacaacgatttcacccaatgggagatgtatgccatc
ggtggcagcggtagcccaaccattaatagccagggcaatcgctacactgctcccttcgat
cataatgccaaggaggtgacgaagagagtggagacaggagaaggggaatggagggactgg
aattggagatcagagggagacataatggttaatggagcgttcttcgtggcatcagggcag
ggtgtggaggtcaagtacgagaaggcctacagtgtggagcccaagtcagctgtcctcatt
gaccacctcgtcatgcacgccggggtcctcggagttggtggcagggacaacaacttggga
aaatgggggacaggacccaatggcggcgaagctggattgggaacagacgatgactacaca
gacgactattctgggactgggagaaacaacatgaatagatatgatgctgctctttcttcc
atttttattccaatgacatgcttgttaatttcattcactctaccattgacatccctgtta
taa
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