Tripterygium wilfordii (thunder duke vine): 119986082
Help
Entry
119986082 CDS
T07256
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119986082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119986082
03400 DNA repair and recombination proteins [BR:
twl03400
]
119986082
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119986082
Messenger RNA biogenesis [BR:
twl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
119986082
DNA repair and recombination proteins [BR:
twl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
119986082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119986082
NCBI-ProteinID:
XP_038686562
LinkDB
All DBs
Position
3:complement(2379592..2390642)
Genome browser
AA seq
905 aa
AA seq
DB search
MLATLKKYFGHSGFRPYQKEVIDKILQGRDCLVVMATGSGKSLCYQVPPLVAGKTGVVVS
PLISLMQDQVMTLKQLGIKAEYLGSAQTDYSVQDKAQDGYFNLLFITPEKACSLPVSFWS
KLLEAGICLFAVDEAHCISEWGHDFRVDYKQLHNLRGILLDVPFVGLTATATEKVRADII
SSLSMRDPYVALGSFDRKNLFYGVKYFNRGPLFVDELVQEISKLVAGGGSIIIYCTTIKD
VEQIFKSLTEAGIKAGSYHGQMGYKAREESHRLFVRDELEVMVATVAFGMGIDKPNIRHV
IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYCGDIQSENQRRAIMESL
MAAQHYCVLTTCRRKFLLSHFGEAYSTSGCGNCDNCMAPRKEHDFSREALLLMTCIQSCK
GDRGLNMPIDVLRGSRSKKILDAHFDKLPLHGLGKDHSSNWWKELAYQLISHGYLVETFK
DLYRTVSVSSKGQQYLSSARPDHQPPLVLTMTSEMIKDREFQSTSSEVGEFKSLATPECD
GFSKAESQLYHMLLQERMKLARGIGTAPYAICGDQTIKKIALVRPSTKARLANIDGVNQH
LVMKHGDHLLQVVRHLSQVLNLSLDGEVSTQDAVASNVDPVPKNKKKLIPAKLEAWRMWH
KDGLSFEQIAKLPGRTAPIKEQTVMEYLLEYLVEAAQEGLEKEWMRYCKEIGLTGEVISD
IQSAISKVGSADKLKPIKNELPEDISYAHIKACLAMQSFKVSPEVIQHGCHGISRADELT
SEVSPIKESQKLEKSVDGTAASCFLDDNKGTSSDTSIHEVEILNVHKELLSPVKRQRVDV
PTILTPLEATESSLLNWLENYEEGVPLSDILEHFGGSKEGSVIHLLTGLEADFMVFKKNG
MYRLM
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgttggctacactcaagaaatactttggccattctggcttccggccttatcagaaggaa
gtgattgataaaattcttcaaggaagggactgtttggttgtcatggccacgggtagcggg
aaatctttgtgctatcaggttcctcctttggttgctggaaagactggtgtagttgtaagc
cctcttatatctttgatgcaagaccaggtcatgaccttgaaacagttgggcatcaaggct
gagtatcttgggagtgctcagactgattactctgtccaagacaaagcccaagatggttat
tttaacttgctgttcatcactccggagaaggcttgttcacttcctgttagcttctggtct
aaattgctagaggctgggatttgtctgtttgctgtcgatgaagcacattgcatttctgag
tggggccatgatttcagggtggattacaaacagttacacaacttacgtggcatactcttg
gacgttccatttgttggcttaactgcaactgctactgaaaaggtgcgagctgacataatt
agttccctgagtatgagagatccttatgttgctcttgggtcttttgatcgtaaaaatctc
ttctatggcgtcaaatatttcaaccgtggtcctttgtttgtggatgaacttgtgcaagaa
atttccaaactcgttgctggtggtggctcaattatcatatactgcacgacaattaaagat
gttgagcagattttcaagtcacttacggaggcaggaattaaggcaggatcatatcatggt
caaatgggctataaagcacgggaggagtcccacagattatttgtaagggatgaactggaa
gtcatggtggccactgttgcttttggcatgggaattgataagccgaacatcaggcatgtg
attcactatggttgtccaaagagcctagagtcttattatcaggaaagtggacgttgtggt
cgagatggcatagcttctgtctgctggctttattatacgagaagcgactttgcaaaagct
gacttctattgtggtgacattcaatcagaaaatcaaagaagagcaatcatggagtcgttg
atggctgcgcagcactattgcgtactgacaacttgcagaagaaagttcttactttctcac
tttggggaagcatattcgacttccggatgtggaaattgtgataactgcatggccccaagg
aaggagcatgatttttctagagaagctttactgttaatgacttgtattcaatcttgtaag
ggtgatcggggactgaatatgccaatagatgttctccgtggttctcggtcaaaaaagatc
ctcgatgctcactttgacaagcttcctcttcatgggcttggaaaggatcactcatcaaat
tggtggaaagagttggcttaccaattaatttcccatggttatttggtggagacctttaaa
gatctatatagaactgtaagtgttagttcaaaaggacagcagtaccttagttctgcaagg
cctgatcatcaaccgccattagtcttgacaatgaccagtgagatgataaaggacagagaa
tttcaaagcacatcgagtgaagtgggagagtttaagagtttagctactcctgaatgtgat
ggattttcaaaggctgagtcacaactctatcatatgctgttacaagagcgaatgaagctt
gcaagaggcatcggaactgctccatatgctatatgtggtgatcaaacaataaaaaagatt
gcattggtaaggccatccaccaaagcaaggttagctaacattgatggtgtcaatcagcac
cttgttatgaaacacggggatcatcttcttcaagttgttcggcatctctcgcaagttctg
aacctttccttagatggggaagtaagcacgcaggatgctgttgcgagcaatgtggatcca
gtacccaaaaataagaaaaaattgatcccggcaaaattagaagcttggagaatgtggcat
aaagatggcctatcatttgaacaaatcgctaaattacctggtagaacagctcctataaag
gaacaaactgttatggagtatcttctggagtatcttgtggaggctgctcaagaaggacta
gagaaggaatggatgagatactgtaaggagattggattgacgggtgaggtgatctcagat
atccagagtgccatctcaaaagttggctctgctgataaactgaaacctattaaaaatgaa
ctaccagaagatataagttatgcgcacattaaggcttgcctggcaatgcaaagctttaag
gtctctccagaggtgattcaacatggttgccatggaattagtagagctgatgaacttacg
agtgaagtaagccccataaaagaatctcagaagctagaaaaatcagttgatggtactgct
gcttcttgtttcttagacgataacaagggtacatcctcagataccagtattcatgaagta
gagattctcaatgtccataaagaacttctctccccagtgaaacgacaaagagttgatgta
cccacaattttgactccccttgaggcaacagagagctcattactaaactggctcgagaat
tatgaggaaggagttccactgtctgatatattagagcactttggaggatcgaaagaggga
tctgttatacatctcctgactggcctcgaagccgactttatggtttttaagaagaatggt
atgtacaggcttatgtaa
DBGET
integrated database retrieval system
