Tripterygium wilfordii (thunder duke vine): 119986239
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Entry
119986239 CDS
T07256
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119986239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119986239
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119986239
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
119986239
NCBI-ProteinID:
XP_038686737
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Position
19:complement(4248728..4252894)
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AA seq
582 aa
AA seq
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MDTSRETESSASPESTGPSSFPDKVLKLVLPLIETHKDRNSVSLVCKDCYNSERLSRSRL
FIGNCYSVSPEIVVRRFPNIRSVTLKGKPRFSDFNLVPEGWGADVHAWLVMFASKYPFLE
ELRLKRMVISDESLEFLAFNFPDFKKLSLSSCDGFSTDGLAAIATDCKNLIELDIQENII
DDRSGDWLSCFPENLTSLEVLNFANLNREVDFDALQRLVGRCKSLKVLKVNGSISLEQLE
ELLVCAPQLTELGTGSFSQEITVQYTDIETAFGNCENLHSLSGLWEATALNLPVMFPACA
NLTFLNLSYAALQGGDIAELLAQCPHLRRLWVLDTVEDEGLEAVGSSCPLLEELRVFPAD
PFDDKAIHGVTEAGFIAVSYGCPRLHYVLYFCRQMTNAAVATVVKNCPDFTHFRLCIIAP
GQPDYITNEPMDEAFGAVVKTCPKLRRLSVSGLLTDLAFEYIGKYAKNLEILSVAFAGSS
DWGMQCVLGGCPKLRKLEIRDCPFGDAALLSGVEMYESMRSLWMSSCNVTMDGCRKLARE
MPRLNVEVIKEDERDEGLADKVYIYRSVAGPRRDAPPFVLTL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagtagagaaaccgaatcgtctgcctcgcccgagtcgactgggccgtcttcg
tttccagacaaggtgttgaagctagtgcttcctctgatcgaaacccacaaagaccgtaac
tctgtctctctggtttgcaaggactgctacaattccgagcgcttgtcgcgttcccgtctg
tttatcggcaactgttactcagtctcccctgaaattgttgtcaggaggttccccaatatc
cgaagtgtgactctaaaggggaagcctcgattctccgacttcaatctggtgccggaaggt
tggggcgccgatgtccacgcttggcttgtcatgtttgcttccaagtacccgtttcttgag
gagctcaggctgaagagaatggttatcagtgatgagagtctggagtttttggctttcaac
tttcctgattttaagaagctctcactctcaagctgtgatgggttcagcactgacgggctt
gcagccattgccacagattgcaagaatttgattgagctcgacatacaggagaacattatt
gatgacagaagtggagattggttgagctgctttcctgaaaacttaacatcattggaagtc
ctgaactttgctaatctgaatagggaagttgattttgatgcactccagagacttgttggt
cggtgcaaatcattgaaggttttgaaggttaatggaagtatttcattggaacaattagaa
gagctgctagtttgtgctccccaattgacggagcttggcactggttcattctcacaagag
ataacagtccagtacactgatattgaaacagcatttggcaattgtgaaaatctgcatagc
ctctctggtttatgggaagcaactgcactgaatctcccagttatgttccctgcctgtgca
aatttgactttcctaaatttgagctatgcagctttacaaggtggtgacattgctgagctt
cttgctcagtgtccacatcttcggcgtctttgggttctggacacagtagaagatgaaggg
ctagaggctgttggctccagctgtcctttgctcgaggaactccgtgtttttcctgcagat
ccatttgatgataaagctatccatggggtgactgaagcagggtttatagctgtgtcttat
ggctgcccaagacttcactatgtcctctacttttgccgacagatgactaatgctgccgtt
gcaacagtcgtgaagaattgccctgatttcacccacttccgtctctgcataattgctcca
ggccagccagattacataacaaatgaacctatggatgaggcttttggtgcggtagtgaag
acttgtccaaagctacggaggctttcagtttcaggtctcttaactgacttggcatttgaa
tacattgggaagtatgcgaaaaacctggaaatcctttcagtggcttttgctggcagcagt
gattggggcatgcagtgtgtcctgggaggatgtccaaagttgaggaaacttgagattagg
gactgtccttttggggatgccgcacttctctctggtgtggagatgtatgaatctatgagg
tccttatggatgtcttcctgcaatgtgacaatggatggctgtaggaaattggcaagggag
atgccaaggcttaatgtggaggtaatcaaggaggatgagagggatgaaggtctagctgat
aaagtttatatttatcgatctgttgcaggtccaagaagggatgctcctccttttgttctc
accctctaa
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