Tripterygium wilfordii (thunder duke vine): 119986281
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Entry
119986281 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119986281
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119986281
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Helicases
119986281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119986281
NCBI-ProteinID:
XP_038686789
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All DBs
Position
3:110341..116467
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AA seq
603 aa
AA seq
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MAKPKDKPSNDSKHKEEEEEERDDDDKSFEELGLDPRLIRALTKKAIEKPTPIQQVAIPL
ILEGKDVVARAKTGCGKTFAYLLPLLQKLFTAANSKNKVAPSAFILVPTRELSQQVYSEV
VSLVDLCRVQLKVTQLTSSMPVSDLRTAMAGPPDILVSTPGCITKCLSDGVVLTASISHS
LEILVLDEADLLLSYGYEDDLKAFTAVVPRHCQCLLMSATSSADVEKLKKLILHNPFILT
LPEVGEVKDDVIPKNVQQYWISCSARDKLLYALALLKLELVHKKVLVFTNTIDMGFRLKL
FLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIAIDDCETKEKETVNPESNVESRK
SKTHRKPKLDADFGVVRGIDFKNVYTVINLEMPPSVAGYVHRIGRTGRAFSSGASISLVS
TDEMEIFEEIKSFLGDDQNEDLNIITPFSTLTPNAVESLRYRAEDMAKSVTKIAVRESRA
QDLRNEILNSEKLKAHFEVNPKDLDLLKHDKVLSKKPPAPHLRDVPDYLLDRKTHEAIKE
VKLASAAMGKSNNTRRKGLKRKFRKTGDPLKTFSAEASGRGNNHRSNKGKSNDTSGQKKK
KAQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacctaaagacaaaccatcaaacgatagcaaacacaaagaagaagaagaagaa
gagcgagatgatgatgacaagagcttcgaggagctgggtttagaccctcgtttgattcga
gctctaaccaaaaaggccatagaaaagcccactcctatccaacaagtcgccattcctctc
atactcgagggcaaagatgtggttgcgcgagcgaagaccggctgtggcaagacttttgct
taccttcttcctctgcttcagaagctcttcactgctgctaactccaaaaacaaggttgct
ccgtcggctttcattctggtcccgactcgcgaactgtcccagcaggtttactcagaggtg
gtatcactagttgatttatgtcgagttcagctgaaagttacacagttgacgagcagcatg
cctgtttctgatttgcgaactgcaatggcggggccacctgatattctggtctctactcct
ggttgcataactaaatgcttgtccgatggtgtggttctgacagcatccatcagccattca
cttgaaattctggtgcttgatgaggcagatcttctgttgtcatatgggtatgaagatgat
ttaaaagcttttacagctgttgtcccaaggcattgtcaatgccttctcatgtctgctacc
tcgagtgctgatgttgagaaactgaagaagctgatactacataatccctttattttaact
ttgccagaagtaggggaggttaaagatgatgttatccccaaaaatgttcagcaatactgg
atttcatgcagtgctcgggataagttactctatgcccttgccctcttgaagttggagttg
gttcataaaaaggttctcgtattcaccaatactattgacatgggtttcagactgaaacta
tttctagagaagttcggaatcaagtctgctgttttaaatgctgagttgccacagaattct
cgtctccatatccttgaggaatttaatgctgggctttttgattatttgattgcaattgat
gactgcgaaacaaaagagaaagaaactgttaatccggagagtaatgttgagtcgagaaag
tctaagacgcatagaaagccaaaattggatgctgactttggggtggtgaggggaattgac
ttcaaaaatgtttacacggtaataaacttggaaatgcccccaagtgtagcaggatatgta
catcgaattggacgtactggaagagcttttagttctggcgcttctatttctcttgtttcc
acagatgagatggaaatatttgaggagataaaatcctttcttggggatgatcaaaatgag
gacttaaacattattactccattctcaacgcttactccaaatgcagtggagtctttaaga
tacagggctgaggatatggcaaagagtgtgacaaaaattgctgttagagaatcacgggct
caggacttgaggaatgagattctcaactctgaaaagttgaaggctcattttgaagttaat
ccaaaggatttagatctattgaaacacgacaaggttttgagcaagaagccgcctgctccc
catttacgagatgttcccgactacctattggaccgaaaaactcatgaagccatcaaggag
gttaagcttgctagtgctgcaatgggaaaaagtaacaacactcgccgaaaaggattgaag
agaaaatttagaaaaactggcgatcctctgaagacattctctgcggaggcttcaggaaga
ggaaacaatcatagatcgaataaagggaaaagcaatgatacctctggacagaagaagaaa
aaagctcaatga
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