KEGG   Tripterygium wilfordii (thunder duke vine): 119986760
Entry
119986760         CDS       T07256                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:twl04131]
    119986760
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:twl04147]
    119986760
Membrane trafficking [BR:twl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    119986760
Exosome [BR:twl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119986760
  Exosomal proteins of bladder cancer cells
   119986760
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 EIF3I TPR_COPA_B WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 G-patch_2 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Zn_ribbon_19
Other DBs
NCBI-GeneID: 119986760
NCBI-ProteinID: XP_038687366
LinkDB
Position
20:complement(8648823..8654573)
AA seq 1286 aa
MLTKFETNSIRVKGLSFHSKRPWILASLQSGVIQLWDYRMGTLIDRFDEHVGPVRGVHFH
KSQPLFVSGGGDYKIKVWNYKLHQCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDHTVRVWDIGALKKKTVFPADDILR
LSQKNTDPFGSVDAVVKYVLEGHERGVNWAAFHPTLPLIVSGADDHQVKLWCMNDTKAWE
VGTLSGHMNNVSCVLFHAKQDIIVSNSEDRSIRVWDVTKRTGVQTFRWKHDQFWILSCHP
EMNLLAAGHDSGMIVFKLERERHAFAVSGDSLLYAKDRFLRFFEFSTQKDTQVIPIRQPG
SFSLNQSPRTLSYSPTENAVLLCSDVDGGSYELYIIPSSNVGRGDNMQEAKRGIGGSAVF
IARNRFAVLDKIGNKVIVKNLKNEAVKNVELKFHADAIFYAGTGNMLCRAVDRVQIFDLQ
QSAVLGELHTPFIKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLQETIRVKSGAWDDK
GVFIYTTLNHVKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDRDGKNRSIVIDATEYM
YKLSLLWQRYDHVVSMIRNSRVRGQAMIAYLQQKGFPEVALHFVKDDKTRFNLALESGNI
QIAVASAKEIDEKDHWYKLGVEALRQGNAGIVEYAYQRTKSFERLSFLYLITGNMEKLSK
MLKNAKVKNDVMGRFHNTLYLGDVQERVKILENVGHLPLAYITAKTHGLQDTAERLAAEL
GDNIPSLPKGKVPSLLMPLTPIMCAGDWPLLGIMKGIFKGGLDNVGRGAAKCKLNMRWSD
QLGKTRLPTGAARQAQMTFLDSWPPVIPPRQNQWPHFRFRNRETLHEELNRLPEHRGTME
YACMHVEDFGPAYLRGYGWRGEIEEEPAMWDDNEEEGCREREDLELPPETDTPKASTNAR
SSVFVAPTSGMPLSHIWIKRSSLAAEHASAGNFDTAMRLLSMQLGIRNFGPLKSMFLDLH
AGSHSYVRAFPLAPVTSLAIGRGWNESAIPNVRVPPALVFNLSQLEEKLQMGYKATTSGK
FNEALHVFISILHTIPLIVVESRREVDEVRELIITVKEYVLGLKMELKRRELKDNPVRQQ
ELAAYFTHCNLQWPHLRLALLNAMTLCFKAKNLATAANFAQRLLETNPPNETQAKTARQV
LQAAEREMNDAYELNYDFRNPFVTCGATYVPIYSGQNDVSCPYCSSRFVLSQEGQLCSVC
DLSVVGANASGLLCSPSQILLFKVVT
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgttgacaaaatttgagacgaatagtatcagagtgaagggactgagtttccacagcaag
cggccatggatcctggcgagtcttcaaagcggcgtgatccagctatgggactatcgaatg
ggaactctgatagacaggtttgacgaacatgttgggcccgttcgtggcgttcatttccac
aaatctcaaccactttttgtgtctggaggaggtgattacaagatcaaagtttggaactat
aagttgcatcagtgcctatttacacttcttggacaccttgattacattcgcactgtgcag
tttcatcacgagtatccatggattgtgagtgccagtgatgatcagactattcgcatatgg
aactggcagtctcgcacttgcatttctgtattgacgggccacaatcactatgttatgtgt
gcctcattccaccccaaagaagaccttgttgtatcagcctctctagatcatactgtacgt
gtttgggatattggtgccctgaaaaagaagactgtcttccctgcagatgacatcctacgg
ttgagtcagaaaaacacagatccgtttggcagtgtggacgctgttgttaagtatgtcttg
gaaggtcatgaacggggagtcaactgggctgctttccatcctactctgcctttgattgtc
tcaggtgcagatgaccaccaagtgaagttgtggtgcatgaacgacacaaaggcttgggaa
gtgggcaccttgagtgggcacatgaataatgtttcatgtgttctgttccatgccaaacag
gatatcattgtttccaattcagaggacagaagcatccgcgtgtgggatgtcactaagcga
actggtgttcagactttccgatggaagcatgaccaattttggattctttcatgtcaccct
gagatgaatctcctagctgctggacatgacagcggaatgattgtttttaagttagagaga
gagagacatgcctttgcagtaagtggtgattctttgctctatgccaaagaccggtttctg
agattctttgagttttcaactcaaaaggacacacaagttattccaatcagacagcctggg
tcattcagcttgaaccagagcccaaggaccctttcttatagtcctactgaaaatgctgtc
cttctctgctcagatgtggatggtggatcctatgagttatatatcatccctagcagcaac
gttggtaggggtgataacatgcaagaggcaaaaagaggtatcgggggatcagctgtattt
attgctcggaataggtttgcggtgcttgacaaaattggcaacaaagttatagtgaagaac
ctgaaaaatgaggctgttaaaaatgttgaactcaaatttcatgcagatgcaatattctat
gctggtacaggtaacatgttgtgtagggcagtggatagggtgcaaatttttgatctccag
cagagtgcagttcttggtgaacttcacacaccttttatcaagtatgttgtttggtctaat
gatatggagagtgttgccttgctcagcaaacatgccatcatcattgctagcaagaagctt
gtacatcaatgcactcttcaagagacaattcgtgtaaaaagtggtgcatgggatgataag
ggtgttttcatttatacaactcttaatcacgttaaatactgtctcccaaatggagatagt
gggataatcagaaccctcgatgtcccaatatacatcacaaaggtttctggaaacaccctc
ttttgcttggatcgcgatgggaagaataggtcaatagttattgatgcaactgaatatatg
tacaagctgtctctgttgtggcagaggtatgatcatgttgtgagcatgattaggaactca
cgggttcgtgggcaggcaatgattgcttatctgcaacagaagggatttcctgaagtagct
ctccattttgttaaggatgacaaaactcgtttcaatttggcactggagagtggaaacatt
caaattgctgttgcatcagctaaggagattgatgagaaagatcactggtataaattgggg
gtggaagcacttcgccaaggcaatgcaggtattgtggagtatgcctatcagaggacgaag
agttttgagagattgtctttcctttatctcataactggtaatatggagaagttgtcgaag
atgctgaaaaacgcaaaagtgaagaatgatgtcatgggtcggtttcataacaccctatat
ctgggtgatgtccaggaacgtgtcaagatcttggagaatgtgggccacttacctcttgct
tatatcaccgctaaaacccatggtctacaagatacagctgagcgattagccgctgagttg
ggagataatattccatctctaccaaagggtaaggtaccctcccttttgatgcccctgact
ccaataatgtgtgctggtgattggcctcttctgggaatcatgaaaggcatctttaaaggt
gggctggataatgttggcaggggtgctgcaaagtgtaaattaaatatgcgctggagcgac
cagctcggcaagactagacttcctacaggtgcagcaaggcaagcacaaatgacattcttg
gactcctggccacccgttattccacctcggcagaatcaatggccccattttaggttcagg
aatcgggagaccttgcatgaggagttgaataggctgcccgagcatagagggactatggag
tatgcttgtatgcatgtcgaggacttcggtccagcctatcttcgtggatatggctggaga
ggagagatcgaagaagagccggcaatgtgggatgataacgaagaagagggatgcagggaa
cgtgaagatttggaacttccccctgagacagacacacctaaggcttccaccaatgctcgt
tcttctgtgtttgtggcaccaacttctggcatgcctcttagccatatttggatcaagaga
tcttcactcgctgctgaacatgcttcagctggcaattttgacactgcaatgcggctgctc
agcatgcaacttggaataagaaactttggtccattgaaatccatgtttcttgatcttcac
gctggcagccattcctatgtacgtgcttttccattagctcctgttacatcactcgcaatt
ggacgaggatggaatgagtcagctatccctaatgtgagggtgccaccagcacttgtgttc
aatctctctcagttggaggagaaacttcagatgggctataaggcaactacttctgggaaa
ttcaatgaggctcttcatgtcttcattagcattcttcataccattcctctgattgttgtt
gagtcgaggagggaagtggatgaagtcagggagctgattattacagtcaaagaatatgtt
ctgggtttgaaaatggaactaaagaggagggaattaaaagataatccagtacgtcagcag
gaacttgcagcctatttcacccattgcaacctgcagtggcctcacttacgccttgctttg
ctaaatgcaatgactctgtgcttcaaggcaaagaacctcgccactgctgctaattttgcc
cagcggctactagagacaaaccccccaaatgagacccaagcaaagacagcaaggcaagtg
ctgcaagctgctgagagagagatgaacgatgcatatgagctcaattacgattttagaaac
ccatttgtgacttgtggagcgacttatgtgccaatttacagtggacagaatgatgtttcc
tgcccttattgtagttctcggtttgtgctgagccaggaagggcagctatgcagtgtttgt
gatctttcagttgttggggcaaatgcttcaggattgctctgctctccttcccagatacta
ttgttcaaggtcgtaacttga

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