KEGG   Tripterygium wilfordii (thunder duke vine): 119987003
Entry
119987003         CDS       T07256                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:twl01009]
    119987003
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    119987003
Enzymes [BR:twl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119987003
Protein phosphatases and associated proteins [BR:twl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119987003
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119987003
SSDB
Motif
Pfam: PLU-1 JmjC JmjN ARID zf-C5HC2 PHD KDM5_C-hel PHDvar_NSD BT_3657-like_N
Other DBs
NCBI-GeneID: 119987003
NCBI-ProteinID: XP_038687613
LinkDB
Position
20:complement(3505951..3534532)
AA seq 1847 aa
MGKGRPRAVKEGVLGQNSTVSTSGSLIAPPGPVYYPTEDEFRDPLEYIYKIRPEAEPYGI
CRIVPPKSWSPPFALNADSFTFPTKTQAIHQLQVRPPGCDSKTFELEYNRFLEEHCGKKL
KKKVVFDGEELDLCKLFNAVKRFGGYDNVTKDKKWGEVFRFFKSGKKISDCAKHVLCQLY
REHLYDYENYSNWLNKEADRSCKNIVPADEKSEDKIEFSCPKRRRKNIRGEKVKVSHKAE
KKEEELDQICEQCQSGLHGELMLLCDRCNKGWHIYCLSPPLKQVPPGNWYCLECLNSDKD
SFGFVPGKHFSLDAFRRMADRAKKKWFGSGPRSHVQMEKKFWEIVEGLTGEVEVMYGSDL
DTTVYGSGFPRASDQRPDSIEAKVWEEYRSSPWNLNNLPKSKGSMLQAVHHNITGVMVPW
LYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSIPGNEASAFEEVMRNSLPDLFDAQP
DLLFQLVTMLNPSVLQKNGVPVYNVMQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPAD
WLPHGGFAAERYRLYHKSSVLSHEELLCVVAKQGDHDSKVLPHLEEELLRIYTNEKTWRE
QLWKSGFVRSSSMSPRKYPAYLGTEEDPTCIICQQYLYLSAVVCRCRPSAFICLEHWEHL
CECKSSKHRLLYRHSLAELYDLLLPVVKNSSEERPRSNNSRRRISFSSELCLLKKKVKSG
NVTFGQLAEKWILRSCKISQNPYSADEYATLLKDAEQFLWAGYEMDPMREVVKNLIEAQN
WAEGIRDCLSKIEKWSCHHDSDLERVKFEYVNKLLQFDPVPCNEPGRLKLKDWAQDARML
IQQVDDALSTSSNLSELEALCARACSLPIYVQESEKLSQKISSAKVWIDSVRKYVADKRP
AAIAVDVLYKLNSEMKELEVNLPEAEMLLNLLRQAELCRVRCNEILNGLTSLQNVEGVLQ
EWNTFTINIPELALLKQYHFDALSWITRVNDVLENVHERKDQCNVIDELNCILKDGAYLR
IQVDKLPLVEAELKKACCRQKALKAREIKGPLESMQQLMMEAVVLHIEGEQLFVDMSMIL
EKALHWEQRATGILAHGAQMSDFEDAIRNSEDIWVVLPSLDDVQDAVSLAKSWLENSKPF
FGSAFSGIPTHSLPKIDSLKELVSQSFLLKISFEEPKLLERVLKNCEQWENDACSILLEA
DCLFDLSDIGSEISNGLRSKIECLITKLETITKAGLSLGLDFPQIPKLQNACSMLQYCST
TLSFCSVVPSLKEVENLLEAVEKFSVKWSACSLWVILVNGVKWLKKASEVVSFSSNFRKC
KMSEAQELLAESQSISISFPMLVGLLVKAIEEHKLWQEQVNQFFSLESQERSWPQILQLK
ELGKAAAFNCSELDMILSEVEKVEKWKRRCLAILGPSVDDMNVLLGALQKIQQSMERSLY
IYDKLREWTARKICFCYPCYQGDQEYLTCSSCEDCYHLHCLESTSIDADCAEVYKCTYCQ
VLEGGSTFQSGGSPLRFKGRRPELKVLIQLISDAESFCIRIEERDMLQQLMDQALLLKSF
LAEIISFASSYRDKNLSIIRKKLSIAFKAIEMAGVYDHQDHCDLQMALARNSWRLRVNRL
LEGIEKPTIKQIQQHLKEGVAMNIPPEDHFRQKLVELECIGLWWADRAKKVARDSGALVL
DEVFELITEVENLPVHLDRELKWLRARTMLYCICRKPYDEMTMIACDQCNEWYHIACVKL
HSPRKVYICGACRPQTGECVMLDHERSTDSISVEPKTPSPQHTKSRKRAKGVKSSLTQKM
IAITNHSSPSGCSSGMDRLWWQNRKPFRRLAKKRTDFECLVPFYHRQ
NT seq 5544 nt   +upstreamnt  +downstreamnt
atggggaagggaagacctagggctgtgaaggaaggggtgttagggcagaactcgactgta
tcaacttctggttcattgattgcgccgcctgggcctgtgtattatcctactgaggatgaa
tttagggatccattagagtatatatacaagatcaggcctgaggctgagccttacggaatc
tgtaggattgttccaccaaagagttggtctccaccatttgcgctgaatgctgattctttt
acatttcccacgaaaacacaagccattcaccaattgcaagtgcggcccccggggtgtgat
tctaagacttttgaattagagtacaataggtttttggaagaacattgtggtaaaaaattg
aagaagaaggtggtttttgatggggaggaattggacttgtgtaaattgtttaatgccgta
aagcgttttgggggttatgataatgttacgaaggacaagaagtggggggaagtttttcgt
tttttcaagtccgggaagaagatctctgactgtgcgaaacacgtgctgtgtcagttgtat
cgtgagcatttgtacgattatgaaaattattccaattggttaaataaggaggctgatagg
agctgtaagaacatagtaccagccgatgaaaaaagtgaagataaaattgaattttcttgc
ccgaagaggaggcgaaagaatattcgaggtgaaaaagtcaaggtttctcataaggctgag
aagaaggaagaagagcttgatcagatatgtgagcaatgccaaagtgggttgcatggtgaa
ctgatgcttttgtgtgatcgatgtaacaaagggtggcacatttactgtctttctcctcct
ttaaagcaggtacctccagggaactggtattgcttggagtgcttgaattctgacaaggat
agttttggttttgtacctggcaaacatttttcgttggatgctttcaggcgtatggctgat
cgtgcaaagaagaaatggtttgggtcgggaccccgttctcatgtgcaaatggagaaaaag
ttttgggaaattgtggaggggttgactggtgaggttgaagtaatgtatggtagtgactta
gataccaccgtttatgggagtggttttccacgtgcaagtgaccagagaccggattcgatt
gaggctaaagtatgggaggaataccgttccagtccttggaatctcaataacttgccaaag
tcaaaaggctcaatgcttcaagctgttcatcataacattactggtgtcatggtgccgtgg
ctttatattggcatgttattctcatctttttgctggcattttgaagaccattgtttttac
tcaatgaactatctacattggggtgagccaaaatgttggtacagtatccctggtaatgaa
gccagtgcttttgaggaggtgatgcggaatagtcttcctgatctgtttgatgcccaacca
gatttgctgtttcagctcgtaaccatgttgaatccatccgtcctacaaaaaaatggggtt
ccagtctataatgtgatgcaggagcctggaaattttgtcatcactttcccaagatcttac
catgctggattcaatttcggtctgaactgtgcagaggctgtcaatttcgctcctgctgac
tggctacctcatggtggttttgcagcagaacggtatcggctgtatcataaatcttctgtg
ttatctcatgaggagcttctttgtgtggtagccaagcagggtgatcacgatagcaaagtt
ttgccacatcttgaagaagaattgctaaggatttatactaatgagaaaacttggagagaa
caactttggaaaagtggcttcgtcagatcatcttccatgtccccacggaaatatcctgca
tatcttggtactgaagaggatccaacatgcattatatgccagcagtatctttatctttct
gctgttgtctgccgctgtaggccatcagctttcatatgtttggagcactgggaacacctt
tgcgaatgcaaatccagcaaacatcgtcttctttatcgtcattcgctggcagaattatat
gatttgttgcttcctgtggttaaaaactcttccgaggagagaccacggagcaataattca
cgtaggcgaatctcattctccagtgagctgtgtttattgaagaaaaaggtgaaaagtggc
aatgtaacttttggacaacttgctgaaaaatggattctacggtcctgtaagatctcacaa
aatccatattctgctgatgaatatgctactttgctgaaggatgctgaacagtttctttgg
gctggctacgagatggatccgatgcgggaagtggtaaagaatttgattgaagctcaaaat
tgggcagaaggcataagagattgtctttctaaaattgagaagtggtcatgtcatcatgac
agtgatttagagagagtgaaatttgaatatgttaataagttgttgcagtttgatcccgtg
ccatgtaatgaacctggacgccttaagttgaaggactgggcacaagatgctaggatgttg
attcagcaagttgatgacgctctgtccacatcttcaaatctctctgagttagaagcatta
tgcgccagagcttgtagtttgccaatctatgtacaagaaagcgagaagttgtcccagaaa
atcagttcagcaaaggtctggatcgacagcgtaagaaaatatgtggctgataaacgtcct
gcagcaattgcagttgatgttctttacaaattaaactcagagatgaaggagcttgaagtt
aatcttccagaagcagaaatgcttttgaatctattaaggcaagctgaattgtgtcgagtt
cggtgcaacgaaattctaaatggtcttactagtctgcagaatgttgaaggggttctccaa
gaatggaatactttcacgattaatataccggaattggcccttctgaagcaataccacttt
gatgctctttcatggattactcgtgttaatgatgtcttagagaatgttcatgaacggaag
gatcaatgtaatgtaattgatgagttgaactgcattcttaaagatggggcatatttgaga
attcaagttgataagttgcctcttgtggaggctgagttgaagaaggcttgttgcagacag
aaggcattgaaggctcgtgaaatcaaagggcctttggaatcaatgcagcagctgatgatg
gaggctgtcgtcttacacattgagggagagcaattatttgttgatatgtcgatgattctt
gagaaggctctacattgggaacaaagagcaacaggaattcttgcacacggggctcagatg
tctgactttgaggatgctataaggaattcggaagatatatgggtagtcctcccttctctg
gatgatgtccaagatgcagtatcactggcaaagtcttggttagagaattctaaaccattt
tttggttctgccttttctgggattcctacccattctttgccgaagatcgatagtctcaag
gagttggtttctcagtctttcttactgaagatatcttttgaagaaccgaaattacttgaa
agagtattaaagaattgtgagcaatgggagaatgacgcctgctctatacttcttgaggca
gattgcctgtttgatctaagtgatattggcagtgaaataagcaatggtcttcgttcgaaa
attgaatgtttgattactaaattggaaaccattacaaaagctggattatctcttggtctt
gactttcctcagattcctaaactccaaaatgcttgttcaatgctgcaatattgcagtaca
accctttctttctgttctgtcgttccttctctcaaggaagtagagaatttgttggaggct
gtggaaaagttttctgttaaatggtctgcttgttctctttgggttatattagttaatggt
gtgaaatggctcaagaaagcctcagaggtagtttccttctcaagcaatttcagaaaatgc
aagatgagtgaagcccaagaacttcttgctgaatcgcagagcataagcatatccttccca
atgttggttggtttacttgtcaaagccattgaagagcacaagctatggcaagaacaagtg
aatcaattctttagtttggaatctcaggagaggtcttggcctcagatattacagctcaag
gaacttggtaaggctgccgcctttaattgttcagagctagatatgattttatctgaagta
gaaaaggttgagaagtggaagcgacgctgcctggccatcttaggaccgtctgttgatgac
atgaatgtattacttggagctctgcaaaagatacaacagtccatggaaagatctttgtac
atatatgacaagttgcgggagtggacagcaagaaagatatgcttttgttatccttgttat
caaggggatcaggaatatctaacttgttcttcatgtgaggactgctatcatttgcattgc
ctggagtcaacttcaattgatgctgactgcgcagaggtatataaatgtacgtattgtcag
gttttagagggtggatcaacatttcaaagtggaggcagtcctttgagattcaaagggagg
cgtcccgagctgaaagttcttattcagctcatatctgatgctgaaagtttctgcattagg
attgaagaaagagatatgctgcaacaactcatggatcaagctcttttattaaaaagtttt
ttggcagaaataatttcttttgcatcttcttatcgggataaaaatcttagcattattcgt
aaaaagctaagtattgcttttaaggccatcgaaatggctggtgtgtatgatcatcaggac
cattgtgaccttcagatggccttggcaagaaattcatggagactcagagttaatagatta
ctggagggtatagaaaagcccacaatcaaacagattcagcagcatttgaaagagggagtg
gctatgaatataccacctgaagaccactttaggcagaaacttgtagagttggagtgtatt
ggtctgtggtgggcagaccgagctaaaaaggttgcaagagactcgggggctcttgttcta
gatgaagtttttgagcttattacggaagttgagaatttgcctgtgcatttagaccgagaa
ttaaagtggctaagagctcgaactatgctttactgtatttgtcgaaaaccttatgatgag
atgacaatgattgcctgcgatcagtgcaacgagtggtaccacattgcatgtgttaagtta
cattccccacgaaaagtttacatttgtggtgcatgtaggcctcagacaggagaatgtgta
atgttggatcatgagagatcaaccgactctatctctgtagagcctaaaacaccctctcca
cagcacacgaaatcaaggaagagagctaaaggagtcaagtccagtctaacacaaaagatg
attgcaattacaaatcacagtagcccttctggctgttctagtgggatggatcgtttgtgg
tggcagaatcggaagccttttaggaggcttgctaaaaaacgtactgatttcgagtgtctt
gttccattctatcatagacagtaa

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