Tripterygium wilfordii (thunder duke vine): 119987024
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Entry
119987024 CDS
T07256
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119987024
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119987024
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
U-box type E3
119987024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4
U-box
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
119987024
NCBI-ProteinID:
XP_038687656
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All DBs
Position
20:1391099..1399467
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AA seq
850 aa
AA seq
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MAVYYKFKSAKDYDSVTMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRMPIVTQQEPKVETKMEDTQPVKSSIPFADASVTKYTEDVE
WDEFGHDLYAIPEAPPIQASNPLIDAPPTNNADEDSKLKALIETPALDWQRQGVDGFGGP
GRGYGRGMAGRMGGRGFGFERKKPPEGYVCHRCKTPGHFIQHCPTNGDPNYDVKRVRPPT
GIPKSMLIATPDGSYALPSGAVAVLKPNEAVFEKEIEGLPSTRPVGDLPPEMHCPMCNEV
MKDAVFTSKCCFSSFCDKCIRDHIISKSRCICGATDVLADDLLPNKTVRDTINRILENGG
NSSAENAGSAFQVQDMESKIPQPRIPSPIHSVGSKGEEKPPCRKEETPIVKEMVDEVKPL
NAHPRVLEQVRTVKVADISEATLESMSIKEPASQRSAPPVEEEVQQKLTSGEAGKKKKKK
KVRNPSNDLQWRTSQDLAADPYMMPLGPSAYNPYWNGMQLGMEGYMGPYAGGIPYMGPSA
YNPYLDMPFGGIMPPDPFGAQGFMMPVVPPQRDLAEFGMGMNVAPPVMSREEFEARKADV
KRRRENGRHDESREFSSGRNFNREVGGVDDGSSMKSKSKTLPWSSGGDPHHRRSERPSPD
LSARGCLEPPPLPLKRKSIEHHDSNRDRDRGRDDARKDGASDRRHHHQPRSSEPKPTHTE
SAAAAAAAAADRKQKASVFSRISFPEGEAAKKRKHSSSSDIAAASGANASNHKSSAAYED
YKASKAVALASSAGGRKNTSVATADYESSDDERHFKRKPSRYEPSPPPPEEWEDRARHSK
GSGDRERRHR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtattacaaatttaagagtgcaaaagactatgattcagtcactatggatggt
ccttttatctctgttggtactttgaaagaaaaaatatttgaatcaaagcatctaggcagg
ggtacagacttcgaccttgtggtcactaatgcccagactaatgaagagtatcttgatgaa
gcgatgttaatcccaaaaaatacatctgtgttaattcgacgggttcctggacgacctcga
atgcctattgttactcagcaagagccaaaggtagaaactaaaatggaggacacccagcca
gtaaagagtagcatcccttttgctgatgcatctgttacaaaatataccgaggatgtcgag
tgggatgagtttggtcacgacttgtatgcaattcctgaggcccctccaattcaggccagc
aatccattaattgatgctccgccaacaaataatgctgacgaggatagcaaactgaaggcc
ttgattgagactcctgccttggactggcagcgtcaaggtgttgatggttttggtggtcca
ggaagaggttatggaaggggtatggctggtagaatgggtggacgtggttttgggttcgag
cggaaaaaacctccagaaggctatgtatgccatcggtgcaaaacacccgggcatttcata
cagcactgtcctacaaatggtgatccaaattatgatgtcaaaagagtgaggccgcctacg
ggcattcctaagtcaatgctgattgccaccccagacggctcttatgcattgccgagtggt
gcagttgctgttttgaagccaaatgaggctgtttttgagaaagaaatcgaaggcttacct
tccactcgtcctgttggtgatcttcctccggaaatgcactgccccatgtgcaatgaagta
atgaaagatgctgtcttcacgagcaaatgctgtttctcaagtttttgtgataagtgtatc
agggaccatatcatatcaaagtcaaggtgcatttgtggtgcaacagatgtactcgctgat
gatcttctgccaaataaaacggtaagggatacaatcaaccgtattttagagaatggtggt
aatagtagtgctgaaaatgccggaagcgcctttcaagtccaagatatggagtcgaagatt
ccacagcctagaattccatcacctattcattctgttggatccaaaggagaggagaaacca
ccgtgccgtaaggaggaaacccctattgtaaaggaaatggtagatgaagtgaagcctttg
aatgcccatccaagggtcttggagcaggtgaggactgtgaaagtggctgatatatcagaa
gctacgctagagtctatgagtataaaggagcctgcttcacagagaagtgctccaccagtg
gaggaagaagtgcagcagaagctaacttctggtgaggcaggaaagaagaagaaaaagaag
aaagtccgcaatccttcgaatgacttacagtggcgaacctctcaagatcttgcagccgat
ccatatatgatgccacttggaccctctgcttataatccttactggaatggcatgcagctg
gggatggaagggtacatgggtccctatgctggtggaataccctatatgggaccctctgcc
tataatccttacttggacatgccttttggtggtatcatgcctccagacccttttggtgca
caaggcttcatgatgccagtagtcccaccacagagggatcttgcagaatttggaatgggt
atgaatgttgcacctcctgtcatgagcagagaggaatttgaggctcgtaaggccgacgtg
aagcggcggcgtgaaaatgggagacatgatgaaagcagggaattctctagtggtcggaac
ttcaacagggaagtgggcggcgttgatgatggttcttcaatgaaatcaaaatctaaaact
cttccttggtcatcaggtggggatccgcaccaccgcagatctgagaggccctcgccggat
ctttccgcacgcggctgcctagaaccacctcctctgcccttgaaaagaaagtcgatcgag
caccatgacagcaaccgtgatcgggatcggggtcgggatgatgctcgtaaagatggggcc
agcgaccggcgccaccatcaccagcctcgttcttcagagcccaagcccactcacactgag
agtgctgcagccgccgccgccgctgctgccgaccgcaagcagaaggcaagcgttttctct
cgcataagctttccggagggggaagcagccaagaagcgcaagcactcctcttcgagcgat
atagctgctgcatccggagctaatgcatctaatcacaagtcgtcagcagcctacgaggac
tataaggcatcaaaggcggtggctttggcatcatctgcgggaggcaggaagaacactagt
gttgctaccgctgactatgagtcgagtgacgacgagaggcatttcaagagaaagccttca
aggtatgagccatctccacctccaccggaggagtgggaagaccgtgcaaggcactctaag
ggctccggggatcgggaacgcaggcatagatag
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