Tripterygium wilfordii (thunder duke vine): 119987054
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Entry
119987054 CDS
T07256
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119987054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119987054
03036 Chromosome and associated proteins [BR:
twl03036
]
119987054
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119987054
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119987054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
119987054
NCBI-ProteinID:
XP_038687697
LinkDB
All DBs
Position
20:1224254..1232435
Genome browser
AA seq
1039 aa
AA seq
DB search
MFGSTSPFGQSSSSPFGTQSVFGQNSGASNNPFAPNPFGNATPFGSQTGSSIFGGTSTGV
FGATQSSSPFSSTTAFGASSSPFSTPAFGASSTPAFGSSSSSFGGSSVFGQKPAFGGFGS
ATQTTPFGSTTQQSQPAFGSSVFGSSSPFGISSQAAFGATSTPGFGTTSNPAFGAASTPA
FGATGTPAFGATSTPAFGATSTPAFGSTSTPAFGSTGSAFGVSNSQMFGSGGAFGASSSP
AFGSAGTPAFGASGTPAFGASGTPAFGASSTPSFNFGSSPAVGQSASAFGSSPFGNATAP
FGAQSSPFGTQATASAFGSSTFGQSAGGMPRVGSRVAPYTPTTDTDSASGTQPTGKLESI
SAMPVYKDKSHEELRWEDYQVGDKGGPPPAGQSAAGVGFGAPAAQSSPFASSSTFGQTSA
NPFSSSTSSNLFASNSSGFGGQGFGSSSTPAGSSPFAPASSANPFSTSSVFGTTSASAFG
SGSSPSVFGSSSSSTFGSSPSIFGSTSQTPSIFGSTSQATTPGFGSSINFGNTQTSPLFQ
STAPSLGQTGSAFGQSTAPSFGQITTPSFGQQGGFSSSGFGGSFFSSASSMIPSSSPMGF
GQITPSISTPFQPAQPPQTTGAFGFSNFGQTQAANTSGFGGTSNLFGQSNLGQFSATQGS
TAGQPAPITNPFGTLPAVPQMSIGQAGAAPSVRYGISSMPVVEKPAPVRISSLLTSRHLS
QRRIRWPARKYQSKNDGPQVPFFHDDVETVSTPKADALLIPRENPRALVIRPIDQWPSRS
NAEKPSPLKDRSTPVHENGKASEEANIPADGDNNPVEDGIMKEQVHHKVNQKPNGVHDDH
SVQKEDAYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGF
CRHVKDFVVGRHGYGSIKFLGETDVRRLDLEALIQFNNREVIVYMDESKKPPVGQGLNKS
AEITLLNIKCFDKKTGQYTEGPKIEKYKEMLRRKAEDQGAEFVSYDAKKGEWKFRVNHFS
TYKLEDDEDDWYTQTTSVC
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactagcccttttgggcagtcatctagtagcccatttgggacgcagtcc
gtctttgggcagaacagtggtgcaagtaataatccttttgctcccaatccttttggcaat
gcgaccccatttggttcacaaacaggtagttccatttttgggggtacttcaactggtgtg
tttggggctacccaatcttcttcacctttctcttcaacaacggcatttggtgcttcgtct
tcacccttttcaacacctgcttttggagcgtcttctaccccggctttcggtagttcatcg
tcatcctttggtggatcttctgtttttggtcagaagcctgcttttggtggttttggctct
gctactcaaacaactccttttggaagcacaacccagcagtctcagcctgcatttggcagt
agtgtatttggttcttcctcaccttttggtatatcaagtcaggctgcttttggtgccaca
agcacccctggatttggtaccacgagcaaccctgcttttggtgcagctagcactcctgcc
tttggtgccactggcactccggcatttggcgccactagcactccggcatttggcgccact
agcactcctgcctttggttcaacatcaactccggcatttggtagcactggttctgcattc
ggtgtgtcaaattctcagatgttcggatctgggggagcatttggtgcttcgagctctcct
gcatttggttctgcgggcactcctgcatttggtgcttcaggcacccctgcttttggggct
tcgggcacccctgcttttggggcttcaagtaccccatccttcaactttgggtcctcccct
gcagttgggcaatcagcttctgcatttggtagtagcccctttggaaatgctactgctcct
tttggagctcagagttccccttttggaacccaggctacagcgtcagcatttgggagtagt
acctttgggcagtctgccggtggaatgccgcgtgtgggaagcagggtagccccttataca
ccaacaacagatacagatagtgccagtggtacacagcctactgggaagttggagtcaata
tcagccatgcctgtctacaaagataaaagccatgaggaattaagatgggaagactatcaa
gtgggagataaaggtggaccgccccctgctggtcaatctgctgctggggttggctttggt
gctccggctgcacagtccagtccttttgcttcatcatcaacatttggtcaaacatctgca
aatccattttctagctcgacttcctccaacttatttgcttcaaactcttctgggtttggt
ggtcaaggttttggaagttcttcaacccctgcaggttcttcaccttttgctcctgcttct
tctgccaaccccttttcaacctcatctgtatttggaacaacttcagcatctgcatttggg
tctggttcatctccttcagtttttggatcatcaagctcatcaacatttgggtcgtcccct
tccatctttggttctacatctcagacaccatccatatttggctctacatctcaggcgaca
actccagggttcggctccagcattaatttcggtaacacacagacatctcccctattccag
tccaccgcaccttcacttggacagacgggttctgcttttggacagagtaccgccccttcc
tttggacagattaccaccccttcctttggtcagcagggcggattcagttctagtggtttt
gggggaagctttttctcaagtgcttcatcaatgattccttcaagtagtccaatgggtttt
ggccaaataactccttctatttcgacgccttttcaaccagctcagcctccacagactact
ggtgcttttggcttcagcaactttggtcagacacaagcagctaatacaagtggctttggt
ggtacatcgaacctttttggtcagagcaatttgggacagttttctgccacacaaggctca
actgccgggcaaccggcgcccattacaaatccatttggaacactccctgcagtgccccaa
atgtcaattggtcaagctggagctgccccttcagttcgatatggaatttcatccatgcct
gttgttgaaaagcctgctcctgtgagaatatcatccttattgacttctcgacacctttca
caaaggcggattaggtggcctgcaaggaaatatcagtctaagaatgatggtccacaggtt
ccatttttccatgatgatgtagaaacagtcagcacgccaaaggcagatgctcttttaatt
cccagggaaaatccaagagctttggttattcgccccatagaccagtggccttcaagatct
aatgcggagaaaccatctcccttgaaggataggtctaccccagtacatgaaaatggtaaa
gcatcggaagaagccaatattcctgctgatggagacaacaatccagttgaagatggcatc
atgaaggagcaagttcatcataaagtcaaccagaaacctaatggagtccatgatgatcat
tctgttcagaaggaggatgcatatatgacactcagtggccacagggctggtgaggctgca
attgtgtatgaacatggggctgatatcgaggcattaatgccaaagcttcgacgttctgat
tactacacagagcctcggatccaggaattggctgccaaggaaagggctgaaccggggttt
tgcaggcatgtgaaggactttgtggttggacgacatggatatggcagcatcaagttcttg
ggtgagacagatgtgagacgacttgatcttgaggccttgattcagtttaataaccgtgag
gtgattgtatatatggatgaaagcaagaaaccgcctgttgggcaaggtctcaataagtct
gccgagataacccttctcaacataaaatgctttgacaaaaagactggacagtatacagaa
gggccaaagattgagaaatacaaggagatgcttaggaggaaggctgaggaccaaggtgca
gagtttgtgtcctatgacgccaaaaagggggagtggaagttcagggtcaaccacttcagt
acttacaaactcgaggatgacgaagatgactggtatactcaaaccacctcagtttgctga
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