Tripterygium wilfordii (thunder duke vine): 119987369
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Entry
119987369 CDS
T07256
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119987369
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
twl01002
]
119987369
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119987369
04121 Ubiquitin system [BR:
twl04121
]
119987369
Enzymes [BR:
twl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119987369
Peptidases and inhibitors [BR:
twl01002
]
Metallo peptidases
Family M67
119987369
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Others
Others
119987369
Ubiquitin system [BR:
twl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
119987369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Fn3_Dep-1_4th
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
119987369
NCBI-ProteinID:
XP_038688184
LinkDB
All DBs
Position
20:complement(10697517..10703229)
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AA seq
528 aa
AA seq
DB search
MRSSSDKINIAASAQKLDVDHRISLRIYYRIADNILRQADIFRSEKNIIDLYVMLLRFSS
LVSETIPRHRDYGSSLPSKKVYLKKKLLNALSELEDLKPVVQQKINELDRKHTQQANGLG
YRHQNDSLEWPYVKKQSYNVTKSVGPAARDLAYQGPRTQQILLSRPVDDQLRRLSLNFVR
PTAETLSRHSIFGPNGLSGQWQPPKSDAVVRYPSSIDLSPIKIPSLAHPLENGLKLKNDN
SNSETDSLQQSLDCGISVEQDCTKTEPERPCLESSLNLNNDGQVQHVEEPAMITFETVET
PVHTNLIRQPSPPPILAEVQDLIPAMTSQVTEAEYKMENPVADEILRAEAPLQLHISTVL
MENFMKLAKSNTDKNLETCGILAGSLKNRKFCVTALIIPKQESTSDSCQATNEEEIFEVQ
DKKSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPKDSSRTHGIFRLTT
PGGMSVIRHCQQRGFHPHDQPPDGGPIYKAGTDVYMNPNLKFDVIDLR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttcttctgataagatcaatatcgcagcaagtgctcagaaactcgatgtcgat
catcggatctctctccgaatctactatcggattgctgataatattctcagacaggctgac
atatttagaagtgagaagaatatcattgatctatacgtcatgcttttaaggttttcaagt
ttagtctcagagacaataccacgtcatcgagattacggatcatctttaccaagcaaaaag
gtttatttgaaaaagaaattgctgaacgctttgagtgagcttgaggatttgaagccagta
gtgcagcagaagatcaatgaattagacagaaaacacacacaacaagcaaacgggttgggc
tatcggcaccaaaatgattcattggaatggccttatgtcaaaaagcaaagctataatgtg
acaaagtctgtgggaccagctgctcgagatttggcttatcaaggtccacgaactcaacaa
attctgctctctaggccagttgatgatcaacttcgcagactatctctaaacttcgtacgt
ccaacggcggaaactctttcgagacattctatttttggtccaaatgggcttagtggtcag
tggcagccacccaagagtgatgcagtggttagatatccaagcagcatagacctgagtcct
attaagatcccaagcttggcacatcctttagagaatgggcttaaactgaaaaatgacaat
agcaattcagaaactgacagcttacagcagtccctagattgcggaatatcagtagagcaa
gattgtaccaaaacagaacctgaaagaccatgtctggaatcaagcttgaaccttaataat
gatggtcaagtgcaacatgttgaggaacctgccatgattaccttcgaaacagtggaaacc
ccagttcacacaaatcttatcagacagccctctcctccaccaatacttgcagaggtgcaa
gatttaatccctgcaatgacttcccaagttactgaagcagaatataaaatggagaatcct
gtggcagatgagattcttcgtgctgaagctcctctacaacttcacatttcaaccgtatta
atggagaacttcatgaagctggcaaagtcgaatactgataagaatttagaaacttgtggt
atccttgcgggctcacttaagaatagaaaattttgtgtgacagctctcattattccaaag
caagaatccacatcagattcgtgtcaggcgacaaatgaagaagaaatattcgaagtgcag
gataagaaatctcttttcccgcttggttggatacatacgcaccctacacaatcttgtttc
atgtcgtctatagatgttcatacccattactcatatcagattatgttgccagaagctgtc
gcaattgtcatggcaccaaaagatagttcaagaacgcatggcatttttcggttgacaaca
ccaggcggcatgtcagtcattagacattgtcagcaacgtggctttcatccacatgaccaa
cctccagatggggggcctatttacaaggccggtacagatgtgtatatgaatcccaacctg
aaatttgatgtcattgatcttcggtaa
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