Tripterygium wilfordii (thunder duke vine): 119987529
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Entry
119987529 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119987529
03009 Ribosome biogenesis [BR:
twl03009
]
119987529
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119987529
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119987529
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Helicases
119987529
Pre-60S particles
119987529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
119987529
NCBI-ProteinID:
XP_038688388
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All DBs
Position
20:9877227..9884142
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AA seq
604 aa
AA seq
DB search
MASEDASSKSKGKRKRNRGKKSIVENPEPELQNAEIVEQAEGEDEEKSNSEGHVEERKEK
KKKKNKKMRKEKVEGIEVEEDDEEEEEEVEGEGEEEKGDEKKKLTVKSGSGIMSTESFES
LGLSKHTFNAIQEMGFPFMTQIQAKAIPPLMIGKDVLGAARTGSGKTLAFLVPAIELLYN
ISFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTLGMVIGGAGRRGEAERIVKGVN
VLVATPGRLLDHLQNTKGFVYKNLKCLVIDEADRILETNFEEEMKQIIKILPKKRQTALF
SATQTKKVEDLARISFQTTPIYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRY
TSKKVMVFFSSCNSVKYHSELLRYIHVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTD
VAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKA
AKVPVKEYEFDQKKLANVQSHLEKLVANNYYLNKSAKDAYRSYILSYNSHSMKDIFNVHH
LDLQAVAASFCFSGPPKINLHLDSSASKFRKKTRKVEGTRNGFSDGNPYGRQGGEDDKRQ
FVRY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagacgcgagctcgaagagtaaggggaagagaaagcgaaatagagggaag
aagtcgattgtagaaaatccagaaccggagctgcaaaatgctgaaattgttgaacaggca
gaaggagaagatgaggagaagagcaatagtgagggacatgttgaggaacggaaagagaag
aagaaaaagaagaacaagaagatgaggaaggagaaggttgaggggatagaggttgaggaa
gatgatgaggaggaggaagaggaagtggaaggggagggggaagaagaaaaaggggacgag
aagaagaagttgacggtgaagagtggttctgggattatgagtaccgagtcattcgaatcg
ttgggattgtccaagcacactttcaacgctatccaggagatgggtttcccgttcatgact
cagattcaagccaaagcaattcctccgcttatgattggcaaagatgttcttggagctgca
aggactggttctggaaaaacccttgcgtttctagtaccagccatagagttgttatataat
atcagtttcactcctcgcaacggaacaggtgttatagtcatttgcccaacaagggaactt
gccatacagactcatgcggttgcaaaggatcttctgaagtatcattcgcagacccttggc
atggttattggtggtgcaggccggagaggtgaagcagaacgtattgtgaaaggtgtgaat
gtattagtagcaacccctggtcggcttctggaccatcttcagaatacgaagggatttgtg
tataagaacttgaagtgtctcgtgatcgatgaagctgacaggatattggagacaaatttt
gaggaagaaatgaagcaaattatcaagattttaccaaagaagaggcaaactgctttattt
tcggcaacccaaactaagaaggttgaagaccttgcccgtatatcatttcaaacaactcca
atctatattgatgtggatgatgggagaactaaggtcactaatgaaggtctgcaacaaggc
tattgtgttgtgcctagtgcgaagagatttattcttctatattcattcttgaagagatat
acatcaaaaaaagtgatggtcttcttttcttcatgcaactcagtcaaatatcattcagaa
cttttgagatatattcatgtggattgctttgatattcatggaaagcaaaagcagcagaaa
cgtacctctaccttttttgacttctgcaaagcagagaagggtatcttgctttgtactgat
gttgctgctcgtggacttgacattcccgctgtggattggattgtgcagtatgaccctccg
gatgaacccaaggaatatattcatagagttggtagaacagcccgtggagaaggtgggaag
ggaaatgccctcctcttcttgattccagaagagttgcaatttctccgttatctaaaggca
gcaaaagttcctgtgaaagagtacgaatttgatcaaaagaagctggcaaatgtgcagtct
catctggagaagctggtggctaacaactactatttgaacaagtcggctaaagatgcgtat
cggtcatacatattatcgtataattctcatagcatgaaagatatctttaatgttcatcac
cttgatttacaggcagttgctgcttccttttgcttttctggccctcctaagatcaatttg
cacttggacagtagtgcgtccaaatttagaaagaaaacgcgcaaagttgaaggaacccgt
aatgggtttagtgatggcaatccttatgggagacagggaggtgaagacgataaaagacaa
tttgtaaggtattag
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