Tripterygium wilfordii (thunder duke vine): 119987886
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Entry
119987886 CDS
T07256
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119987886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119987886
03041 Spliceosome [BR:
twl03041
]
119987886
03036 Chromosome and associated proteins [BR:
twl03036
]
119987886
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119987886
Spliceosome [BR:
twl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119987886
Complex B
119987886
Complex C
U2 SnRNP specific factors
119987886
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119987886
TFTC complex
119987886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
119987886
NCBI-ProteinID:
XP_038688721
LinkDB
All DBs
Position
21:complement(18037883..18044830)
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYNLTLQRPTGILAAIYGNFSGGKVQEIVVARGKVLDLVRPDENGKLQTILSVEIFGA
IRSLAQFRLTGAQKDYIVVGSDSGRIVILDYNKEKNVFDKIHQETYGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTVTYSICGVDCGFDNPI
FASIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLEHDNDRVTELKIKYFDTIPVSAAMCVLKSGFLFAASEFGNHALYQFQAI
GEEEDVEASSMTLMETEEGFQPVFFQPRGLKNLVRIDQLESLMPIMDMKVNNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELVYFVVDLTGNLKEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTMVDMVTGQLSDSRSRFLGLRAPKLFSIVVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVVPLRYTP
RKFVLHPKRKLLVMIESDQGAFTAEEREAAKKECFEAAGMGENGNANNEQMENGGEDEDK
DDPLSDEQYGYPKAESDKWVSCIRVLDPRTSTTTCLLELQDNEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFWPKRSLAAGFIHIYRFKDDGKTLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKKRLLRKCENKLFPNTIVNIHTYRDRIYVGDIQESFHFCKYRRDENQLY
IFADDCVPRWVTASLHIDFDTVAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
NGAPNKVEEIVQYHIGDVVTSLQKASLIPGGGECIIYGTVMGCLGALLPFTSRDDVDFFS
HLEMYMRQEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKIV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaacctcacactccaacgcccgaccggcatcctcgccgccatctatggg
aacttctccggtggtaaggtccaggaaatcgttgtggctcgcggaaaggtcctggacctg
gtccgtcctgatgagaacggaaagctccagaccatactctccgtcgagatcttcggtgcc
atccgttcactggcgcagttccgcctcaccggcgcacagaaggactatatcgtagttggc
tctgactctggccgcatcgtcatccttgattacaacaaggagaaaaacgtatttgacaaa
attcaccaggagacatacggcaagtctggctgccgccgcatcgtcccaggtcagtacctc
gccattgatcctaaaggtagagccgtaatgataggagcttgtgagaagcagaagctcgtc
tacgttctcaatagagatacagcggctaggttgactatatcgtcgccgctggaggctcac
aagtcgcacactgtaacgtactccatttgtggggtggattgtgggtttgataatcccata
tttgcttctatcgagctggattactctgaggccgaccaggattccactgggcaggccgcg
agtgaggctcaaaagaatttgacgttttacgagcttgatctggggcttaatcacgtgtca
aggaagtggtcggagcaggttgataacggtgccaacatgcttgtcactgtgcctggaggc
ggggatgggcctagtggagtgttagtttgtgcagagaatttcgtgatctataagaatcaa
gggcatcctgatgtacgagctgtgattccaaggagagcggatttgcctgcggagcgtggg
gtactaatagtttctgcagctacccacaagcagaaatccatgtttttctttcttttgcag
actgagtacggtgatatatttaaagtgacattggagcatgataacgatagggttacagaa
cttaagattaagtattttgataccattcctgtgtcagccgccatgtgtgtgttgaagtct
ggatttttgtttgctgcttcagagtttggaaaccatgctttgtaccagtttcaggcaatt
ggagaggaagaggacgttgaggcctcatctatgacgttgatggaaactgaagagggtttc
cagcctgtgtttttccagccaagagggttaaagaaccttgtgaggattgatcagttggag
agtttgatgccaataatggatatgaaagttaataatctttttgaggaagaaacacctcag
atattcaccttatgcggacggggtcctagatcctccttaaggatattgaggactggtttg
gctattagtgaaatggctgtctcacagcttccaggtgtccctagtgctgtttggactgtg
aaaaagaatgtcaatgatgagtttgatgcatacattgtggtgtcttttgcaaatgccact
cttgtgctttcaattggtgagacagttgaagaagttagtgacagtggatttcttgatact
actccgtcccttgcggtttcattgattggtgatgattctttgatgcaagttcaccccaat
ggtattaggcatataagggaagatggacgtattaatgagtggagaactcctggaaagagg
acaatcgtgaaagttgggtccaataggcttcaagtggttattgctttgagtggaggggag
cttgtatattttgtagtggatttgactggaaatttgaaagaggtggagaaacatgagatg
tctggagatgtggcttgtttggacatcgctccagttcctgaaggaagacagagatctcgg
tttcttgctgttggttcatatgacaacacaattcgcatcttgtctttggatcctgatgac
tgtatgcagattctcagtgtgcaaagtgtctcgtcggctccagaatccctcctctttctg
gaagttcaggcatcagttggcggagaagatggtgcagatcaccccgctagcctttttctt
aatgctggtctgcagaatggagttctgtttagaacaatggtggatatggtgacaggtcag
ctctctgattctcgttctcgttttctgggtttgagagctcccaagctcttttctattgtt
gtgagaggtcgccgagcaatgctttgcttgtcgagtcgcccttggcttggctatattcac
cagggacattttctgctaacccccctatcttatgagactcttgaatttgccgcctcgttt
tcatctgatcagtgtgcggaaggtgtggttgctgtagctggagatgcgcttagggtgttt
actattgaaagattgggagaaacatttaatgaaactgtagtacccttaaggtacactcct
aggaagtttgtgcttcatcctaagaggaaattgttggtcatgatagaaagtgatcaagga
gctttcactgccgaagaacgtgaagctgccaaaaaggagtgttttgaggctgctggaatg
ggtgaaaatggaaatgcaaacaatgagcaaatggagaacgggggagaagatgaggataaa
gatgaccccctctccgatgagcagtatggttacccaaaggcagagtcggacaagtgggta
tcttgtataagagttcttgatccaaggacgtctacgactacttgtctgctggagcttcag
gacaatgaagctgcttttagcatatgcactgttaattttcatgataaagagtatggaact
ctattggctgttggtactgctaagggactgcaattttggcctaaaagaagtttagctgca
ggatttattcatatttacaggtttaaggatgatgggaaaacccttgaacttttacacaag
acgcaagtggagggcgttcctcttgctttatgccagtttcaaggtagattacttgctgga
ataggacctgtcctgagattgtatgacttgggaaaaaaaagattgctgagaaaatgtgag
aataagctattccccaacactattgttaatattcacacatatcgagatcggatatatgta
ggcgatatccaagagtcattccatttctgcaagtataggcgggacgagaatcaactgtac
atttttgctgatgattgtgttcctagatgggtcactgcatcactccacatagattttgac
actgtagctggtgccgataagtttgggaatatctattttgtgcggttgccacaggatgtt
tcagatgagatagaagaagacccaactggtggaaaaataaaatgggagcaggggaagctt
aatggagctcctaacaaggtagaagaaattgtacagtaccatattggtgatgtggtcaca
agtttacaaaaggcatctctaattcctggtggtggggagtgcatcatttatgggacagta
atggggtgcttgggagcattgcttcccttcacctcccgagatgacgttgatttcttctct
cacctggagatgtacatgaggcaggaacacccacctttgtgtggcagagatcacatggcc
tttagatctgcttattttccggtgaaggatgtgattgatggagatttgtgtgagcagttc
ccgacactgcctatggatttgcagagaaaaatagctgacgaactggatagaactcctggc
gagatactgaagaaacttgaagaagtccgaaataagatcgtttaa
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integrated database retrieval system
