Tripterygium wilfordii (thunder duke vine): 119987955
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Entry
119987955 CDS
T07256
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119987955
03015 mRNA surveillance pathway
119987955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119987955
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119987955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119987955
NCBI-ProteinID:
XP_038688793
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Position
21:complement(2570941..2577299)
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AA seq
412 aa
AA seq
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MAKQNKGRRSPPSGSVSGSSSRSRSRSRSVSSSRSRSLSRSRSRSKSFSSSSTSPSRSFS
SLSRSPPPQRKSPDVPKRGRSPPPPSKKSPPPRKVSPTSESLVLHIDSLSRNVNEGHLKE
IFSNFGEVVYVELAMDRNVNLPRGYGYVEFKSRADAEKALLHMDGAQIDGNVVRAKFTLP
PRQKLSPLPKAVASAPKRDATKTDADIEKDVPERQRESASPQRKPLPSPRRRSPVARRGG
SPKRHPDSPPRRHTKSPGRRRVESPYRRGEAPPRRRPASPPRGRSPSPLRRQRSPPRPSL
RRVRGSPIRRRSPPPQRRSPPRRARSPPRRSPFSRRRSRSPIRRPLRSRSRSISPRRGRG
PPMRRRRSSSYSGSPSPSKVTRRISRSRSPRRPMRGRSSSKSSSSTSPPRKP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagaacaaaggccgacgctcgccgccttccgggtccgtttcgggctcatcc
tctcgttctaggtcccgttcccgatctgtgtcctcctctcggtctcgatcgttgtcgcgc
tctaggtcccgctccaaatccttttccagctcgtccacctctccttctcggagtttcagc
tctcttagccgcagccctcctcctcaacgcaaaagtcctgatgttcctaagcgaggtcgc
tccccacccccaccatctaagaaatctccgcccccaaggaaagtctctcccactagtgaa
tctcttgttcttcacattgactcgctcagcaggaatgtgaatgaaggacatttgaaagaa
atattcagcaacttcggtgaagttgtttatgtggagctggcaatggaccgcaatgttaat
cttccaagaggatatggttatgttgagttcaaatctagagcagatgcagagaaggcccta
ttgcacatggatggagcccaaattgatgggaatgttgttcgagcaaagttcaccttacct
ccgcggcagaagctctccccattgccaaaagccgttgctagtgctccaaaaagagatgca
acaaaaaccgatgccgatattgagaaagatgtgccagaacggcagagagaatcagcatcg
cctcagagaaaacctttaccttcacctagaagaagatctcctgtagctcgaagaggagga
tctccgaaacggcaccctgattctcctccacgacggcataccaaatctccaggtcgtcgt
cgtgtagagtccccttatcgccgtggtgaggcacctcctaggcgcagacctgcatcacca
ccaaggggtcgttctccgtctcctctgaggcggcaaagatcacctccaaggccctctctc
cgtagggtacgtggcagtcccattcgtagacgttcgcctccaccccaacgccgttcgcct
cctagaagggcccggagtccacctagaaggtcaccattcagtcgtaggcgtagccgttct
ccaattcgtaggcctcttcgctcgcgttcaagatctatctcacctcggagaggccgagga
ccacctatgagacgcaggagatcttcttcgtattctggatctcctagtccaagcaaggta
acccggagaatctcaaggagtcgcagtcctagaaggcctatgagaggaaggagtagtagc
aagagcagcagcagtacgtcgccgcctcgtaagccatag
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