Tripterygium wilfordii (thunder duke vine): 119988162
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Entry
119988162 CDS
T07256
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119988162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119988162
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119988162
Complex C
U4/U6.U5 tri-SnRNP related factors
119988162
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Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
PRP38_assoc
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
119988162
NCBI-ProteinID:
XP_038689027
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Position
21:16813556..16816055
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AA seq
413 aa
AA seq
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MANRTDPEAKNIRGMDPQNLVDDIVRSNIYQSTYWKRYCFGLSAASLVDRATELDHVGGT
IGGGSKATPFLCLAMKLLQIQPEKEIVVEYINNNDFKYVRVLGAFYLRLTGTDVDIYHYL
EPLRNDFRKLRRVLSDGQFGLIHVDEFIEELLTKDYSCDVALPRIRKRWNLEQIGLLELR
ISVLDEDYEEKEREEEEREAGKIEYEVEDEEKDYGGSYRDRDYERRRSDRRDSREVDSYR
FREQKGRDWRDRECERRDRDDHGGWWRRRSRRSRSRSRDGKGGENSKRCDRRTSPRRCGD
DEDGYIREKPKKKKEKKDDGTDHPDPEISEANRLRASLGLKPLKLLCRMCKLSKSSDCEY
LRMFLSSRTFFKLYKSPRLFVSCVLLLCCFHSNFWLDDCLSSLIAARDTMIKF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtaccgacccagaagcgaagaacataaggggaatggaccctcagaacctg
gtggatgatattgtgagatccaatatttaccagtccacatactggaaaagatactgcttt
ggcctatctgcagcatccttggtcgacagggccacagagcttgaccatgtcggtggcacc
attgggggaggcagcaaggccacgccgttcctctgccttgccatgaagttgctgcaaatc
caacccgagaaggagatcgttgtcgagtacattaacaacaatgacttcaagtatgtgaga
gttcttggtgctttttatctgcgacttactggtactgatgttgatatttatcattatcta
gagcctttgcgcaatgatttccgtaaattgaggcgagtattgagtgatggacagtttggg
ttgattcatgtcgatgaattcattgaagagctcctcacaaaagattattcatgtgatgtt
gctttgcctcggattaggaaaaggtggaatcttgaacagattggtttgctggaactgaga
attagtgtccttgatgaagattatgaagagaaagagagagaggaagaggaaagggaggct
ggcaaaattgaatatgaagtggaagatgaggaaaaggattatggaggtagttatagggat
agagattatgagagaaggaggagtgataggagggacagtagagaagtagacagttaccgt
tttagagaacaaaaaggaagagactggagagatagggagtgtgaaagacgagacagggat
gatcatggtggttggtggaggagacgttcaaggaggagtagaagtaggagtagggatggg
aagggtggagagaactccaagagatgtgaccgcagaaccagtcctagaaggtgtggggat
gatgaggatggctacattcgagaaaaaccgaagaaaaagaaggagaagaaggatgatggc
acagaccatcctgatccggagatttctgaagctaatagactccgcgcatcccttgggttg
aaacctttgaaactgctatgcaggatgtgcaaattatcaaagtcatctgactgtgagtac
cttagaatgttcctatctagtagaacttttttcaagctctataaatcgcctcgcttattt
gtttcatgtgtgttgttgctctgctgttttcattcgaacttctggttagacgattgctta
tcaagcttgattgctgccagagacaccatgattaagttctga
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