Tripterygium wilfordii (thunder duke vine): 119988275
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Entry
119988275 CDS
T07256
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
twl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119988275
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119988275
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
119988275
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119988275
03036 Chromosome and associated proteins [BR:
twl03036
]
119988275
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119988275
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119988275
SWI/SNF complex
119988275
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119988275
PBAF complex
119988275
SWI/SNF complex
119988275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
119988275
NCBI-ProteinID:
XP_038689179
LinkDB
All DBs
Position
3:2595724..2599106
Genome browser
AA seq
238 aa
AA seq
DB search
MKLPASSKTPVKFRIPTLENLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTVKD
LKLPPAFVTQIAQSIQSQLQEFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDLNN
FDSDPEVFARTFCKDLGIQDPEVGPAIAFTIREQLYEIAIQSVATARENRLSKKGRRGAE
HFPPSKSSGTALEVMKVFNNKYSVVRKRKEWDVYEPIVDILSNEEVDALEAREERLAR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggcgtcttccaaaacccctgtcaagttcaggataccgactctggagaat
ttggtgccaattcgattggacatagagatcgacggtcaccgcttcaaagatgctttcacc
tggaatccttctgaccctgactcggaggtggtcgtgtttgcgaagaggaccgtgaaagac
ttgaagcttcctccggcattcgtgacccagatcgctcaatcgattcagtcacaacttcaa
gagtttcgatcatacgaagggcaagatatgtatactggtgagaagattgttcccatcaag
cttgatcttcgagtgaatcatactctgataaaggatcagtttttgtgggacttgaacaac
tttgacagtgatcctgaagtgtttgctagaaccttctgcaaagacctgggtattcaagac
cctgaagtcggacctgcaattgccttcacaatcagggaacagctctatgagattgcaatt
cagagtgtcgctactgcaagagagaacagattgagcaaaaagggtcgccgtggtgctgaa
catttcccacctagtaaaagtagtggtactgcactggaggtgatgaaggtattcaataac
aaatacagtgtagttaggaaaaggaaggagtgggatgtatatgaacccattgttgatatt
ctatcaaatgaagaagtggacgcccttgaagcaagagaggagagacttgctaggtga
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