KEGG   Tripterygium wilfordii (thunder duke vine): 119988378
Entry
119988378         CDS       T07256                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020  RNA polymerase
twl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119988378
  09124 Replication and repair
   03420 Nucleotide excision repair
    119988378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:twl03021]
    119988378
   03400 DNA repair and recombination proteins [BR:twl03400]
    119988378
Transcription machinery [BR:twl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     119988378
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119988378
SSDB
Motif
Pfam: RNA_pol_Rpb4 NAPRTase_C
Other DBs
NCBI-GeneID: 119988378
NCBI-ProteinID: XP_038689325
LinkDB
Position
21:complement(5555435..5559512)
AA seq 217 aa
MGEKGGKGFSVPKSSLKSPTNYASAKGKDDNSTNLKKGRKTKFGSESPSQVKFSFQSNYD
GTFNAGNAKGGKGDNMAKGKKDSIKKQEPLQLRKQDIPKNAKCLTDCEAAQILQTIQDHM
VVLSKDPTFKIHESFGSGLQYAKAGAPYTNPQSVRRVLETLIPYGVSDGEISVIANVCPE
TVEEVFALVPSLKAQRSKLREPLNHALTELSKLKMST
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggggagaaaggaggaaaagggttttcagtacccaaatcttcactcaagtctccgaca
aactatgcatcagcgaaagggaaggatgataactccactaacttgaagaagggaaggaaa
actaagtttggctctgaaagtccaagtcaggtcaaatttagttttcaatcaaattatgat
gggacgtttaacgctggaaatgccaaaggaggaaaaggagacaacatggcaaaaggcaag
aaggattctatcaaaaagcaagaaccgcttcaacttagaaaacaggatattcccaaaaat
gcaaaatgcctaacggactgtgaggctgcacaaatcttgcagacaatacaggatcatatg
gttgtgttgtctaaagatccaacctttaaaatccacgaatcctttggcagtggcttgcag
tatgctaaagctggtgctccatataccaatccacaatctgttagacgagttcttgagact
ctcattccatatggtgtttctgatggcgaaatatctgttattgcgaatgtttgtccagaa
actgtagaggaagtttttgcgctggttccatccttgaaggcgcagagaagcaagctgcga
gaacccctcaaccatgcattaactgagctgtctaagcttaaaatgtcaacatga

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