Tripterygium wilfordii (thunder duke vine): 119988638
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Entry
119988638 CDS
T07256
Name
(RefSeq) putative pectate lyase 21 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119988638
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119988638
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119988638
NCBI-ProteinID:
XP_038689676
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Position
21:18012382..18016091
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AA seq
331 aa
AA seq
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MAMLPYADVDFSLRALAGRAEGFGRFAIGGLHGLLYHVTNLADDGPGSLREGCRRKEPLW
IVFDVSGTIQLSSYLNVSSYKTIDGRGQRVKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFTNHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GQKKKTFEYYVEKAADKEEKISGLIKSEGDEFLNGAQPCLLTEVGEESVFHPSIYYPTWT
MEAPGDSLKDVLQICTGWQSIPRPTELTIIA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgctgccgtacgctgatgtggacttcagcctgagagcattggccggtcgcgcg
gagggctttggccgtttcgccatcggcggcctccacggattgctctaccatgtcactaat
cttgctgatgatggtccgggatcacttcgtgaaggatgtcggagaaaggaacccctatgg
attgtttttgacgtttctggcactatacaactgtcatcttacttgaatgtctcgtcttat
aagactatcgatggacgtggccaaagggttaagctcacaggcaaaggattaaggctaaag
gaatgtgaacacataattatttgcaatctggagtttgaagggggtagaggacatgatgtt
gatgggatccagataaagccaaactccaggcacatatggatagaccgatgcagccttcgt
gattatgatgacggactcatagatatcacaagacaaagcacagatattacagtatctaga
tgctactttacaaatcacgacaagacaatgcttattggagcagatccatctcatgttggt
gatagatgcattcgggttaccattcaccattgcttttttgatggaacacgacagagacag
ccacgcgttagatttggaaaagttcacttgtacaacaattacacgagaaattggggaata
tatgctgtttgtgcaagtgtcgaatctcagatatactctcagtgcaatatatatgaagct
ggacagaagaaaaagacttttgaatattatgtggagaaggcagcggacaaggaagaaaag
atatcagggttgataaaatctgaaggagatgagttccttaatggagctcaaccatgcttg
ttaacagaggttggtgaagagtcggtgttccatccaagcatatattatccaacatggacc
atggaagcccctggagattctctgaaagatgttctgcaaatttgtactggttggcaatcc
attcctcgaccaacagagctgacgataattgcatag
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