Tripterygium wilfordii (thunder duke vine): 119988972
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Entry
119988972 CDS
T07256
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030
DNA replication
twl03410
Base excision repair
twl03420
Nucleotide excision repair
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119988972
03410 Base excision repair
119988972
03420 Nucleotide excision repair
119988972
03440 Homologous recombination
119988972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
119988972
03400 DNA repair and recombination proteins [BR:
twl03400
]
119988972
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119988972
DNA replication proteins [BR:
twl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
119988972
DNA repair and recombination proteins [BR:
twl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
119988972
NER (nucleotide excision repair)
GGR (global genome repair) factors
119988972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
119988972
NCBI-ProteinID:
XP_038690169
LinkDB
All DBs
Position
21:4523385..4533748
Genome browser
AA seq
1188 aa
AA seq
DB search
MATGVSSTHTSPFRPFCSPYSRVYRSCCPCSVPLTSRSTRILHRHEDQKTSYNTFSNINM
YNSSIGFQHYSGKTSIDKKTCNWKLEIGPCASKASMLQLYLDQNCSGRKHFTRTIINQER
MGVKSGKLPRNSRRAPAVEFIKNYPCGRKVFSTATHGSEYLHGSAVSWTKERENLAKQKK
EQTFVGEMKFQHDGNQHAYPSKVKCTLKTEPFYQSQLTEKQACSEIVGRQHSAIKNYAAP
VQIQPSQGAEYLENIGWHVNTKNYDASALSGTESKGTATGRRPLYNVNDQCADGPCKTDM
PFINGQGEGARARGSFRAESIVKGEKFEQIGDEVADLKKCQLDGEQTTNVTDNHIKSSDK
DEASVIQADLQKRLTSIYRDILVVDNISKAKEVVGMLTSRYRHLVHACDTEVAKIDVKQE
TPVDHGEVTCFSIYSGPEADFGNGKSCVWVDVLDGGGRALFLEFAPFFEDPSIKKVWHNY
SFDNHVIENYGLKLSGFHADTMHMARLWDSSRRTEGGYSLEALTGDKRVMSSAGDKKTSR
FAAGNQRTVSEANSQNIMPEAGSFHEDLLGKISMKTIFGRRKIKKDGSEGKMITIASVEE
LQREERELWICYSALDAKSTLKLYESLKAKLLNMCWKLDGEPVRGKNMFDFYLEYWQPFG
GLLVEMETAGMLVDRAYLAHIEKVAKTEQEVAVSRFREWASRYCPDAKYMNVGSDAQLRQ
LLFGGRKNSITDDVLPVVKEFKVPNVDKVVEEGKKAPKKYQTIKLRRIVSELPTDIYTPS
GWPSVSGVALKTLAGKLTAEGDFMDDNLLLEDEIIETLEGEESCGSTDVNENDDGTVFKA
FECENETREACLAIASLCEICSIDSLISNFILPLQGSNVSGESGRVHCSLNINTETGRLS
ARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLANCKSMLLAFEAG
GDFHSRTAMNMYSNIREAVEKREVLLEWYPQPGEDRPPVPLLKDAFASERRKAKMLNFSI
AYGKTPVGLSRDWKVSVNEAKKTVALWYGERQEVLEWQEARKKEALEDRRVHTLLGRARN
FPSVSRGNRSLRGHIERAAINAPVQGSAADVAMCAMLEISKNIRLKELGWRLLLQVHDEV
ILEGPTETAEVAKEIVVECMSKPFNGKNILRVGLSVDAKCAQNWYAAK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggggtctcctccacacatactagcccctttagaccgttttgctctccttat
tctcgggtataccgttcttgttgtccctgctctgtccctttgacttcccgttccactaga
atccttcacaggcatgaagaccaaaaaacctcctataataccttctccaatattaatatg
tataatagttccattggatttcaacattattctgggaagacatctattgataagaaaaca
tgcaactggaaacttgagattggtccttgtgcatcaaaagctagtatgctccaactctac
ctagatcagaattgctctggtcgaaaacattttacaaggacgattattaatcaagagaga
atgggtgtaaaaagtggaaaacttcccagaaactctaggagagcaccagcagtggagttc
ataaaaaattatccttgtggacgcaaggtattcagcactgctactcatggtagtgaatat
ttgcatggcagtgcagtttcatggacaaaagaaagagaaaacttggcgaaacagaaaaag
gaacagactttcgtaggtgagatgaaatttcaacacgatggcaatcagcatgcttacccc
tcgaaagtcaaatgcaccctcaaaactgaaccattttaccaaagtcagcttactgagaaa
caagcatgttctgaaattgttgggaggcagcacagtgctattaagaattatgctgcacct
gtacaaatacagcctagccaaggggcagaatatttggaaaatattggatggcatgtcaat
actaagaattatgatgcatctgctttatctggtactgaatcaaaggggacggctacaggc
cgtagacctttatataatgtgaatgatcagtgtgctgatggtccatgtaaaacagatatg
ccatttatcaatgggcagggagaaggtgcccgcgctcgtggttcatttagggcggagtcc
attgtaaaaggggaaaaatttgaacagatcggagatgaagttgctgatttaaagaaatgt
caattggatggtgaacaaaccactaatgttactgataatcacataaagtcctctgataaa
gatgaagcgtctgtgatccaggcagatcttcagaagaggcttactagcatttatcgtgac
atacttgttgttgataatatctctaaagcaaaggaagttgttggtatgcttacaagtcgg
tatagacatcttgtccatgcatgtgatacggaggtggcgaagattgatgtcaaacaagaa
acaccagttgatcatggagaggtgacatgcttcagcatttattctgggccagaagcagat
tttggaaacgggaaatcttgtgtctgggttgatgttctcgatggtggtggaagggccctt
ttccttgagtttgctccattttttgaagatccatccatcaagaaggtttggcacaattat
agctttgataaccatgttattgagaactatggcctgaagctttctggttttcatgccgac
acaatgcacatggcacgtttatgggattcgtctagacgaacagaaggtgggtattctcta
gaggcactcactggtgacaaaagggtcatgtcttcagctggtgacaaaaagactagtagg
tttgcggctgggaaccaaaggactgtctctgaggctaatagtcaaaatattatgcctgag
gctggatcatttcatgaagatttgctaggcaaaatatcaatgaaaaccatttttggccgg
agaaagatcaaaaaggatggttcagaaggtaaaatgataaccattgcttctgttgaagag
ctgcaaagagaagaacgggaactttggatatgttattctgccttggatgcaaaaagcacg
ctaaagctatatgagagcttgaaagcaaaactattaaatatgtgctggaaacttgatggg
gaaccagttcgtggaaaaaatatgtttgacttttatcttgaatattggcaaccatttggt
gggctcttagttgaaatggaaactgcgggaatgctggttgatcgcgcatatcttgctcat
attgagaaagtggccaaaacagagcaagaggttgctgttagtagatttcgcgaatgggct
tcaaggtattgccctgatgctaagtatatgaatgtgggaagtgatgcacaattgcgccag
ttactttttggtggcagaaaaaacagtattaccgacgatgtacttccagtggtgaaagaa
ttcaaggttcccaatgttgataaagtagttgaagaaggcaagaaagctcctaaaaagtac
caaactattaagctgcgaagaattgtgagcgagctaccaactgatatttacacacccagt
ggctggccctcagtcagtggagttgctttaaagacattagctgggaagcttacagctgaa
ggtgattttatggatgacaatttgctgttagaagatgaaataattgaaaccttggaaggt
gaggagtcatgtggctctactgatgtaaatgaaaacgatgatggaacagttttcaaagca
ttcgaatgtgaaaatgagacgagggaggcttgccttgcaattgcttccttatgtgaaatt
tgttccattgactcgttgatatccaacttcatccttcctttgcagggaagtaatgtttca
ggcgagagtgggcgtgttcattgttctctaaatatcaacacagaaacagggcgcttatcg
gctcggaggcctaatttgcagaatcaacctgctctggagaaggatcggtataaaattcgt
caagcattcatagctgcacctggaaattcactcattgttgctgattatggacaactggaa
cttaggattctcgcccatctggctaactgtaagagcatgctgctcgcatttgaagctgga
ggggatttccactcaaggacggcaatgaatatgtattcaaatatccgtgaagctgtggag
aaaagggaagttcttcttgagtggtatccacaacctggtgaagacagacccccagttcca
ttgttaaaggatgcctttgcttctgaaagaagaaaagctaaaatgctcaacttttctatt
gcatatggaaaaactccagttggcctgtcccgggattggaaggtgtctgtgaatgaagca
aaaaaaactgttgctctctggtatggagaaagacaagaagtgcttgaatggcaagaggct
cgtaaaaaagaagcccttgaagatagacgtgttcacactttgttaggcagggctcgcaac
ttcccatcggttagtcgcggaaatcgttctctaaggggtcatattgaacgtgctgcaatt
aatgccccagtgcagggtagtgctgctgatgttgccatgtgtgcaatgttagaaatatcg
aagaatatacgtctaaaggagctcgggtggaggctgcttttacaggttcatgatgaagtg
attttggaagggccaaccgagacagctgaagttgccaaggaaatagttgtcgagtgcatg
tccaagccctttaatggcaagaatatcctcagagtgggcctgtcagtggatgctaaatgt
gctcaaaactggtatgccgcaaaatag
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