Tripterygium wilfordii (thunder duke vine): 119988992
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Entry
119988992 CDS
T07256
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119988992
04121 Ubiquitin system [BR:
twl04121
]
119988992
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119988992
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119988992
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119988992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-C3H2C3
CxC4
Rad50_zn_hook
Zn_ribbon_RPAB4
DUF7573
Motif
Other DBs
NCBI-GeneID:
119988992
NCBI-ProteinID:
XP_038690198
LinkDB
All DBs
Position
21:complement(18334959..18336889)
Genome browser
AA seq
379 aa
AA seq
DB search
MSSPPTATASYWCYSCSRFVRVWSDETVICPDCNSGFVEEIDNPTLATRRTFPAAAMYMV
GNRSNPDQSPTPALRRTRRLPGNRSPINPVIVLRGQSDGDNESRGFELYYDDGGGSGLRP
LPPSMSEFLLGSGFNQLLDQLSQIDMNGIGRCEHPPASKAAIESMPTIIIDDTHIAMESH
CAVCKEAFELESEAKEMPCKHIYHTDCILPWLSLRNSCPVCRHELPADSQGSPLSNHSGR
LLGSSNEEEAVGLTIWRLPGGGYAVGRFSGARRGGESELPVVYTEMDGGFNGGGVPRRVS
WGARGSRGGRETGGLRQLVRNLFSCFGIGNGNESRRSGNGSRSSNSSPSSSSGMRIRSSA
TSVRRRGRAVDFDRERSRW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccgccgacggcaacggcgtcgtattggtgttacagctgcagccgatttgtc
agggtatggagcgacgaaaccgttatttgcccggactgcaacagtggcttcgtggaggag
atcgataacccgacgcttgccacacgaaggacgtttcctgccgcagcgatgtacatggtc
gggaaccgatcgaatcccgaccagagccccacccctgctctccgtaggacccgccgtcta
cccggtaaccggtccccgattaatccggtaatcgtgcttcgtgggcagtccgatggggac
aacgagagtcgtggattcgagttgtattacgatgatggcggtggatcagggttgaggccg
ttgccgccgagtatgtcggagtttttgttgggatccgggtttaatcagttgctggatcaa
ctctcgcagattgacatgaacggaataggtcgctgcgagcatcctccggcgtccaaagct
gcaatagagtccatgccgacaataatcatcgacgacactcacatagcaatggaatctcac
tgtgcagtttgtaaggaagctttcgaattggaatcggaggcaaaggagatgccatgtaag
cacatctaccacactgattgcatcctaccctggctgtccctccgcaactcgtgccctgtt
tgtcgccacgaactgccggcggatagccagggctcccccctgtctaatcacagcggtcgg
cttttgggttcgagcaacgaagaggaggctgtgggattgaccatatggagattgccggga
ggagggtatgcagtggggaggttttctggggcaagaagaggaggggagagtgagctgcct
gttgtgtacacggagatggacggtgggttcaacggtgggggtgtgccaaggagggtgtca
tggggtgcaaggggaagtaggggaggaagagagaccggtgggcttcgtcaattagtccgc
aatttgttttcttgctttgggattggtaatggaaatgaaagtaggaggagtggaaatggg
agtaggagttcaaattcgagcccaagctcgagctcaggtatgaggattaggagtagtgct
acatcggtaaggagaaggggtagggctgtggattttgatagagagaggagcagatggtga
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