Tripterygium wilfordii (thunder duke vine): 119989028
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Entry
119989028 CDS
T07256
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119989028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119989028
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119989028
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
STAT_linker
Motif
Other DBs
NCBI-GeneID:
119989028
NCBI-ProteinID:
XP_038690242
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Position
21:complement(17965318..17969934)
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AA seq
898 aa
AA seq
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MDRSADREKASKRSREDRERESTKEHKHKHRTRDREERHHLSERDSKREKSHEPREHKSS
RREDRESSRDAEHKREKSYEPRDEREKKSRDSKRERSDEPRDRKSYRREDRASSRDREKS
YEPREERVGSKDRIREREMKRERSDEENERNLESESTRKRKERGDNEDMVDEGEKRVRVS
EGKRERRRFEDKVKNEDNDGFEYGRRDHANEIKLKEEVSDERIDAGTTNGGGLIANGTAS
ESFTSKSSDASESIMPPGHSFPTKVYSISTTNENKGVSITRSDEVPGKSSTDGSSAAAGK
SGSLSLDALAKAKKALQMQKELSEKLKKIPMLNKGPSASSDGSLGLKEGVKSLASGAGIG
GRSVPLTTTTSILSSEAQSSSSTLAAVAVASATPATSGIPPVTGLNTVPNIEAVKRAQEL
AAKMGFRQDPQFAPLINLFPGQMPTSVPVPQKPTKAPVLRVDALGREIDEHGNVINVTKP
SNLSTLKVNINKQKKDAFQILKPELEVDPEQNPHFDGRMGIDKTKLLRPKRMTFQFVEEG
KWSKDAELIKLKSQFGDERARELKAKQAQYAKAKAAPDINPNLIEVSERVIIKEKLKESI
PEIEWWDVPLMPNGAYGDIVDGNITDNKFKKEKITIYVEHPRPIEPPAEPAPPPPQPLKL
TKKEQKKLRTQRRLAREKDRQEMIRQGLSEPPKPKVKMSNLMKVLGTEATQDPTKLEMEI
RAAAAEREQAHVDRNLSRKLTPAERREKKERKLFDDPSTLETIVSVYKINDLSHPKTRFK
VDVNAQENRLTGRAVVSEGISVVVVEGGSKSIKRYGKLMLKRINWADAVKEEDDDEDEGD
DKPVNKCVLVWQGSVSKSSFNRFSFHECITEAAARKVFVDAGVAHYWDLAVNFSDDQI
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcagccgatagagaaaaagcgagcaaacgatcccgggaagatcgtgaacgt
gaatcaaccaaagaacacaaacacaagcatcgaacccgagaccgagaggaaaggcaccac
ctatcggaacgagattcgaagagggagaagtctcacgagcctcgcgagcataagtcctcc
agacgcgaggatcgagagagctctcgagatgcagagcacaagcgcgagaaatcgtatgag
ccaagggacgagagagagaagaagagcagagattcgaagcgggagaggtctgacgagcct
cgcgaccgcaaatcatataggcgtgaggatcgtgcgagctctcgagaccgagagaagtcg
tatgagccgagggaggagagagtgggaagcaaagataggattcgcgagagggagatgaag
cgcgagcgatcagatgaggagaacgaaaggaatttggaaagtgaatcgactagaaagagg
aaagagcgaggagacaacgaagatatggttgatgaaggagagaagagggttagagtttct
gaagggaaaagagagaggaggagatttgaggataaagtaaagaatgaggataacgatggt
tttgagtatgggagaagagatcatgcaaatgagattaagctgaaggaagaagtgagtgac
gaaagaatcgatgcgggaacaacgaatgggggcggcttgattgcaaatggcaccgcttcg
gagtcatttactagtaaatcaagcgatgcttctgagtccattatgccccctggtcattcc
ttccctacaaaggtatattcaatttctaccaccaatgaaaataagggagttagtattacc
agatctgatgaggttcctggaaaatccagtacagatgggtcatctgcagctgctggtaaa
agtggaagtctatcacttgatgctctagcaaaagctaaaaaagctttacaaatgcagaag
gaattgtcagagaagttgaagaagatacccatgttgaacaaggggcctagtgccagttca
gatggtagcttaggattaaaggaaggagtgaaatcattagcttctggtgcgggaataggg
gggaggtctgttccattgacgacgaccacctccattctttcttctgaggcacaatcaagt
tcgtcaaccttagctgctgttgctgtagcctctgcaacaccagctacaagtgggattcct
cctgttactggccttaatactgttcctaatattgaagctgttaaacgtgctcaagagctt
gctgctaagatgggttttcgccaggatcctcagtttgctcctctcataaacttgtttcct
ggacagatgccaacaagtgttcctgtgccacagaagccaaccaaggcccctgttctccgt
gtggatgcacttggtagagaaatagatgaacatggaaatgtcattaatgtgactaaacca
agcaatcttagcaccttaaaggtcaacattaataagcagaaaaaagatgcatttcaaatt
cttaaacctgagcttgaagtggatccagaacaaaacccccattttgatggaagaatgggc
atcgacaaaacaaagcttttgagacctaaacgaatgacattccagtttgtagaggaaggc
aaatggtcaaaagatgcagaactgataaaattgaagagtcaatttggagatgaaagagca
agagagttaaaggcaaagcaagcacagtatgcaaaggcaaaggcagcccctgatataaat
ccaaatttaattgaagtatcagaaagagttataattaaagaaaaactcaaagaatcaatt
cctgaaattgagtggtgggatgtgcctctcatgcctaatggtgcttatggcgatattgtc
gatggcaacatcactgacaataagttcaaaaaggagaagatcactatctatgttgagcac
cctcgtcctattgagcctccagctgagcctgctcctccccctcctcaacctctcaagcta
actaagaaagagcagaagaaacttcgtactcagcgtcgtcttgccagagaaaaggatagg
caggaaatgatcagacaaggcctttctgagcctccaaaaccaaaagttaaaatgagcaat
ttaatgaaagttcttggcactgaggcaactcaggatcccaccaaacttgagatggaaatc
cgtgctgcagctgctgagcgtgagcaagctcatgtggataggaatctttcacgcaagctt
actcctgccgaacgccgagagaagaaggagaggaagcttttcgatgaccctagtacactg
gaaactattgtttcagtgtacaagatcaacgacctttcacacccaaaaactcgcttcaag
gttgatgttaatgcgcaagagaaccgtttgaccggccgcgcggtggtttcggagggaatt
agtgttgtagttgttgaaggtggaagcaaatctatcaagagatatgggaagctgatgctt
aagcgtataaattgggcagatgcggtgaaagaagaagatgatgatgaggatgaaggggat
gacaaacctgtcaacaagtgtgtgttggtttggcaaggaagtgtttcaaagtcaagtttc
aataggttctcctttcatgaatgcattacagaagcagctgcaagaaaggtttttgttgac
gccggtgttgctcactattgggatcttgctgtgaacttctcagatgatcaaatttga
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