Tripterygium wilfordii (thunder duke vine): 119989208
Help
Entry
119989208 CDS
T07256
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119989208
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119989208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
119989208
NCBI-ProteinID:
XP_038690529
LinkDB
All DBs
Position
21:complement(14262588..14266283)
Genome browser
AA seq
659 aa
AA seq
DB search
MAKKKLSLITQGSYVILDNGLVRLTILKPQGYLTGIKYGGMDNLLDLKSNESSRGYWDVN
WSLPGGQDRYQLVSGAEYSVIHRSNDQIEVSFKKTYNPSTPGHNLPLSIDTRYALRSDVT
GFNCYAIYEVPPGSPAFDLAQTRMVFKLRREKFHYITISDQKQRVMPMPEDLLPGRGKQL
IVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSDPIIGFWVIFPSNEFRNGG
PTKQELTVHTGPNCLAMFHGTHFIGDDILAHFQDGETWRKVFGPFFVYLNSTPNVSNAYN
LWIDAKKQRLVEEAAWPYDFVSTPYYLTAKERGSATGRLFVQERFVSGNLIPAKYAYVGL
SAARTEGAWQTESKGYQFWVQTDANGNFTIKNVIPGVYGLHGWVPGFIGDYLDNAPVTIS
AGSNTLLGNLTYTPIRDGPTVWEIGFPDRTAIGFYVPDVNPMYVNKLFKSHEKFRQYGLW
DRYTDIYPDTDQIFTIGVSDPKKDWFFAHVDRRGADNEYLPTTWTIKFNIDSVISGTYKL
RLAMASVTRTDLKVHVNVIDTQHLVFQVMNLGTDNAICRHGIHGLYRFYSIDIPSTLLVK
GDNSLFLVLARGGDSLCGILYDYMRLEAPASSGRIKEIEEQKQGREMDRCLVYNLSFED
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaattgagcttgatcacccaaggttcatatgtgattctggataatggt
ttggtaaggctcacaatactgaagcctcaagggtatttaacaggaattaagtatggagga
atggacaaccttcttgatctcaagtcaaatgaatccagtagaggatattgggatgtcaac
tggagtttgccaggcggtcaggaccgataccaactagtaagcggggctgaatacagtgtt
attcataggagtaatgaccaaatagaggtttcattcaagaaaacatacaatccatcaact
cctgggcataatttgccactcagcattgataccaggtatgctttgaggagtgatgttaca
ggattcaactgctatgctatatatgaggttcctcccggatctcctgcttttgatcttgct
cagacaaggatggtgtttaaactgcgacgagaaaagttccattacataacaatctcggat
cagaagcaaagggtaatgccaatgccagaggatctacttccaggtagaggcaagcagcta
atcgtacccgagtcagttctgttggttaatcccatcaatcctgatctaaagggcgaggta
gatgataagtaccagtactcaatggacaacaaagatgggggagtccacggatggataagt
tcagaccccattattggtttttgggtcatcttccctagcaatgagtttcgaaatggaggt
cctacgaaacaagaactcacagtccacacaggtccaaactgccttgctatgtttcatgga
actcactttatcggagatgatatattagcgcattttcaagacggagagacatggaggaaa
gtgtttggtcccttctttgtataccttaattcaactccaaatgtatcaaatgcatataac
ttatggatagatgcaaagaagcagaggctggttgaagaggcagcatggccatatgatttt
gtctcaacaccctactatctcactgctaaagagcgtggctcggcaactggaagattattt
gtccaagagcggtttgtttctggtaatttgatcccagccaaatatgcatacgttggtcta
tccgctgcacgaactgaaggagcctggcaaacagaaagtaagggttatcagttttgggta
caaacagacgcaaacgggaatttcacaatcaagaatgttatcccaggtgtttatggacta
cacggttgggttcctggattcatcggtgattaccttgacaatgcacctgtcacaatttct
gcaggatcgaacacgctgcttggcaatctgacatatactccaatcagggatggtccaact
gtatgggagataggcttccctgatcgcacagcgattggtttctatgttcctgatgtgaac
cctatgtatgtcaacaagttgtttaagagccatgagaagtttaggcaatatggattatgg
gacaggtacactgatatataccctgatacagatcagatcttcactataggcgtcagtgac
ccgaaaaaggactggttctttgctcatgtagacagaaggggtgctgataacgagtacctt
ccaacaacatggacaatcaagtttaatattgattcagtaatcagtggaacttacaagctc
agattggccatggcatcggtgacccgtactgatctgaaggtgcatgtcaatgtgatagac
acacaacacctagtgttccaagtgatgaatttgggaacagataatgcaatttgccgtcat
ggcattcatggactgtatcgattttatagcatcgatattccgtccacattgttggttaag
ggagacaactccttgtttcttgtactggccaggggtggagattcactttgtggaatcctg
tatgattatatgaggctggaagctcctgcatcttctggaagaataaaggagatagaagaa
cagaagcagggcagagagatggacagatgccttgtttataatctcagctttgaagactag
DBGET
integrated database retrieval system
