Tripterygium wilfordii (thunder duke vine): 119989238
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Entry
119989238 CDS
T07256
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119989238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119989238
03016 Transfer RNA biogenesis [BR:
twl03016
]
119989238
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
119989238
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119989238
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119989238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
TUTase
PAP_NTPase
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
119989238
NCBI-ProteinID:
XP_038690565
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All DBs
Position
21:3773650..3781687
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AA seq
539 aa
AA seq
DB search
MDGGEPETQTPVYLYETLTPLSLGTEPTTPNVQSPVSDDALEPYSVFRNEISLYTLDSAV
DVDPSAPDFFSLNVGEPEPEPVTPASAPAEPVTPVRGIEPRLESSWWFGGNSRFKSPMLQ
LHKEIVDFCDFLSPTPEEQASRSMAVECVYDVIKYIWPNCRVEVFGSFKTGLYLPTSDID
VVILGSGIRNPQPGLQALSRALSQREIAKKIQVIARARVPIVKFVEKKSGVAFDVSFDVQ
NGPVAADFIKDAVSKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLQCLR
ESHPVPEHNLGVLLVHFFYFYGRQLNTADVGISCNGAGIFFPKSSRGFMNKGRPSLISIE
DPQAPENDIGKNSFNYFQIRSAFAMAFSTLTNPKTILSLGPYRSILGTIIRPDPVLVERR
GGSMGEMTFDSLLPGAGEPLQLHNEDKQEILCNWQYEDEEEPLPRGDSIVGDFSAPSSEK
KRKSSSRDKSGKKKIKQKAGHEESSSSRREKGTKKKHWRHNKDGVDHRSSHYARSPQSW
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggggaaccagaaacgcaaaccccagtctacctatacgaaaccctaactcct
ctctctctcggaacagaacccaccactcccaatgttcaatccccggtgtctgatgatgcc
ttggagccctacagcgtattccgcaatgagatatcactgtatacgctcgacagtgctgtg
gacgtggatccatcggcgcctgatttcttctctctcaatgttggagagccagagcctgag
ccggtgacgccggctagtgcaccagctgagccggtaacgcctgttagaggaattgagcct
agactcgagagttcatggtggtttggagggaatagcaggtttaagagccctatgcttcag
ctacataaagaaatagtggatttttgtgattttctgtctccaactcctgaagaacaagct
tcccgcagcatggcagtagaatgtgtctatgatgttattaaatatatctggcccaactgc
agggtggaagtttttgggtcattcaaaactggcctgtatcttcctactagtgatattgat
gttgtgattctggggtcaggtatcagaaacccacaacctggtttgcaggctctctctagg
gctttgtcacaaagggaaattgcaaaaaagatacaggtgattgcaagggctcgtgtgccc
atcgtcaaatttgtagaaaagaagagtggtgttgcatttgatgtaagttttgatgtgcaa
aatggacccgtagctgctgattttatcaaggatgcagtatccaagtggcctccattacga
ccactgtgtttgattttgaaagtattcttgcagcagagagaacttaatgaggtatattct
ggtgggataggatcttatgcccttcttgccatgctgatagcaatgttgcagtgtctccgt
gaatcccatcctgttccagaacacaacttgggagttcttctggtgcactttttttatttc
tatggacgccaattgaacacggcggatgttggcatatcttgcaatggagcaggaatcttc
tttccaaagagcagcagagggtttatgaataaagggcggccctctctgatctccattgag
gacccacaggcaccagagaatgacattgggaagaactcttttaactatttccagatacga
tcagcttttgctatggcattttcaaccttgacaaatccgaagaccatattaagtctaggc
ccttacagaagcattcttggtaccataattagaccagacccagttttggtggagcgcaga
ggaggatccatgggagaaatgacttttgatagcttgctgcctggagccggggagccatta
cagttacacaatgaagataagcaggaaattctttgcaactggcagtatgaggatgaagaa
gaaccacttccacgtggagacagtatcgttggagactttagtgctccttcctcagagaag
aaaaggaagtcttcctctcgagacaagtctggaaagaaaaagataaaacagaaagccgga
catgaagaaagcagcagttcaagaagagagaagggtacaaagaagaaacattggaggcat
aacaaagatggtgttgatcatcgtagtagtcattatgctcgatctccgcaaagttggtga
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