KEGG   Tripterygium wilfordii (thunder duke vine): 119989279
Entry
119989279         CDS       T07256                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:twl04812]
    119989279
Cytoskeleton proteins [BR:twl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     119989279
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_EIPR1 eIF2A Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 119989279
NCBI-ProteinID: XP_038690636
LinkDB
Position
21:13256367..13265463
AA seq 1006 aa
MAKGGYKLQEFVAHSANVNCLSIGKKTCRLLITGGDDHKVNLWAIGKPTSLMSLCGHTSP
VESLAFDTADVLVLAGASTGVIKLWDLEEAKMVRTLTGHRSNCTSVEFHPFGEFFASGSM
DANLKIWDIRKKGCIHTYKGHTQGISNIRFTPDGRWVVSGGYDNVVKVWDLTAGKLLNDF
KFHEGHIRSLDFHPLEFLLATGSADGTVKFWDLETFELIGSTRPEATGVCTTTFHPDGRT
LFCGLEEGLKVYSWEPVICHDSVDMGWSTLVDLCIHDGKLLGCSYYQNSVGIWVADTSLI
EPYGAGGFVPKLTDCTEQKCDLPGSLSLEKVGSCARLGFGLHCPAPDYETKEIKNIYVDS
AIGNPVASPRTGSLSSPKVLFPLNSEESNLQTYNQDPAALVRASLNGQGHDKSFIVPGSV
PRDTPDAKETSDSGRESITFSRTKPGMLLRPAHTRRPSTTKCDIDKASVPIEAGTLCNMK
SEKEHSNGPNLQKHLLSEDGVGKSCGQKDSNIKNVVFNVENILSPQTPSNKSKRNESSEC
NNEINSVKIINGVAVVAGRTRSLVERFERRERLDSNGDETINITHQSQQKLNSNEGQETN
TTKSQEKFKSDDGQATSTTQRPEKFYRDRDESSNTIPSQEKFNSNVDQATSTTQRREKVN
SNGGQAPSTTQIQEKVNSNGGQATSTTQIKEKFNSNDDQATSTTQRREKFYNNGGQATST
TQIQEKFNSNEGQATSTMQRREKINSNGSQASNTTQIQDKFNSNGGPATNTMQRREKFSS
YGGRATNVPPRLARYRRSEDQATIMNPHVAPEMDRASNPQTDEPRISGRDSTFANHRDIT
EDLMQTHDVFLSTLRSRMTKLQVVRHFWERNDIKGAISAMRKLPDTSVQADVISVLMEKM
EILNLDLFSWLLPVLMSLLDSKIERHTKISMDMLLKLVAVFGPVIRSTMSAPPAVGIDLQ
AEQRRECCNQCFIQLQKIQKILPLLVRKGGLIAKCAQELNLVLRES
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggcgaagggtggatataagcttcaggaatttgtggctcattcagccaatgtgaactgt
ctaagtattggaaagaaaacctgtaggcttcttataacaggcggcgacgatcacaaagtt
aatctttgggcgattggcaagcccacttctttaatgagcctgtgtggtcatacaagtccg
gttgaatctcttgcttttgatacggcagatgttctggtgcttgctggagcttctactggc
gtgataaagctgtgggatctggaagaagcaaagatggttcgcactcttactggacacaga
tccaattgtacttcggttgagtttcatccatttggtgaattctttgcatctggttcaatg
gatgcaaatctaaaaatatgggatatcagaaagaaaggatgtattcacacttacaaaggt
catactcaaggaatcagtaatatcaggtttactcctgatggtcgctgggttgtttctggt
ggatatgataatgttgtaaaggtgtgggatcttactgctggaaagctcttaaacgatttt
aagttccacgaaggacacattcgatccttagacttccatccccttgagtttctcctggca
acaggttcggcggatggaactgtgaaattctgggatttggaaacttttgagctgattgga
tctacaagacctgaggctacaggagtgtgcacaacgacctttcatcctgatggacggact
ctcttctgtggcttggaagagggtttgaaggtttattcgtgggagccagtaatttgtcat
gattctgttgatatgggatggtcgacactcgttgacctttgcattcatgatggaaaactt
ttaggttgctcatactatcaaaattcagttggcatttgggtagcagatacatcgcttatc
gagccatatggagctggtggctttgtacccaaactaactgactgcacagagcagaaatgt
gatctccctggaagtctttcgttggagaaagtaggaagttgtgcaaggttgggttttggt
ttacactgtccagctccagattatgagacaaaggaaataaagaacatatatgtcgactct
gcaattggaaatcctgttgcatcaccgagaactgggtctttgagttctcctaaagttctc
ttcccattgaattctgaggaaagtaatcttcagacatataaccaggatcctgcggcattg
gtgcgtgcaagcttgaatgggcagggacatgataaatctttcattgtgccaggttctgta
cctcgtgatactcctgacgcaaaagagacctccgattccggaagggaatcaatcacgttt
tcgagaacaaaacctggcatgttacttcgaccagctcatactaggaggccgtcaactacc
aagtgtgatattgataaagcatcggtgcctattgaagccggaactctgtgcaatatgaaa
agtgagaaagagcattcaaatggtccaaacctccaaaaacaccttttatcagaagatgga
gttggaaaatcttgtgggcaaaaagattctaatatcaaaaatgttgtttttaatgttgaa
aacattttatcaccacaaacgccatccaacaaatcaaagcgcaatgaatcctcagaatgt
aacaacgaaatcaactctgttaaaattatcaatggagttgcagttgtggcgggaaggaca
cgctctttggtagagagatttgaaagacgagaaagacttgatagcaatggagatgaaaca
ataaatattacccaccaatcccaacaaaagcttaatagcaatgagggtcaagaaactaat
actactaagagtcaagaaaaatttaaaagtgatgatggtcaagcaactagcactactcag
agaccagagaaattttatagagatagggatgaatcctctaatacgatccctagtcaagag
aagtttaatagcaatgtggaccaagcaactagtactacacagaggcgagagaaagttaat
agcaatggaggccaagcacctagtaccacccagattcaagagaaagttaatagcaatgga
ggtcaagcaactagtactacccagattaaagagaaatttaatagcaatgacgaccaagca
actagtactacgcagaggcgggagaaattttacaacaatgggggtcaagcaactagtacc
acccagattcaagagaaatttaatagcaatgagggccaagcaactagtactatgcagaga
agagagaaaattaatagcaatgggtctcaagcaagtaacactacccagattcaagataaa
tttaatagcaatgggggtccagcaactaacactatgcagagacgagagaaatttagtagc
tatgggggccgagcaactaatgttcccccgagattggcgagatatcgccgcagtgaggat
caagcaactattatgaacccccatgttgcacctgaaatggatagagcatctaatccgcag
acagatgagcctcggatttctggaagggactcgacctttgctaatcatagggatattact
gaagatctgatgcaaactcatgatgtattcttaagtacccttcgatcccgcatgacaaaa
ttacaggtggtacgacatttttgggaacggaatgacatcaaaggggctattagtgccatg
aggaaacttccagatacctcagtgcaggcagatgtgatcagtgtactcatggagaaaatg
gagatccttaacttggatttattctcttggttgcttcctgttcttatgagcttactggac
agcaagatagaaaggcacacaaagatctcaatggatatgctattgaagcttgtagcagtt
tttggcccagtaatacgctcaaccatgtcagcacctccagctgttggcattgatcttcag
gcagagcaaaggcgagaatgctgcaaccagtgcttcatccaacttcaaaaaatccagaaa
attctccctttacttgtaaggaagggtggtttgatagccaaatgtgctcaggaattgaat
ctagttcttcgagaatcataa

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