KEGG   Tripterygium wilfordii (thunder duke vine): 119989433
Entry
119989433         CDS       T07256                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119989433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:twl03021]
    119989433
Enzymes [BR:twl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     119989433
Transcription machinery [BR:twl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     119989433
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 Rab3-GAP_cat_C
Other DBs
NCBI-GeneID: 119989433
NCBI-ProteinID: XP_038690870
LinkDB
Position
21:16354254..16367388
AA seq 1664 aa
MEESTSSSLLEGAITGIKFGLATRQEICTASISDCPISHSSQLSNPFLGLPLEFGKCESC
GTSEPGKCEGHFGYIELPIPIYHPSHISELKKMLSLLCLKCLKIRNNKIKSDSISGKLLS
SCCEDAPQISICEVKTTDGSYLELKLPSKSRLKDGFWNFLEKYGFRYGDNITRALLPCEV
MEILKRIPEESRKKLVAKEFFPQEGYVMQYLPVPPNCLSLPEVTDGAIVTASDPSISMLK
KVLKQVEMIKSSRSGTPNFASHEVEAHDLQSAVNQYLQVRGTVKTSRDLDTRFGINKESD
NSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKGVNEIGIPSEIAQRITFEERVNEHNV
KYLQEMVDNNLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDYVFINRPPTTHK
HSLLALRVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFAVDKQLL
SSHNGKLNLQLATDALLSLKLMFKKYVFDKAAAQQLAMFVPNVLPQPALFKGYSSGPLWT
VMQILQSAMPSCFDCYGFDLSQEAVQPLLNELVTSIFIEKGPKAVLDFFDSLQPLLMEGL
HAEGFSIGLEEFVMSREAVGVEQLDSSVWGDLIDLKSISAVNKVVQQIGLLGLQISDKGK
LYSKTLAEDMASLFERKCHSDGDQSAKNGFIKSCFFHGLNPFEEMMHSISTREVIVRSTK
GLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNLGTKSQSLFPAGEPVGV
LAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVGFKNDVIDRRIILYLNECRCGKKY
CRERAVYLVKNHLNKVSLKDIAVDFLIESQQISESVDADAFLVGHVHLNKKLLKEMNINM
SEVLQKCQDTANLYHRKKKVGQLFKKTVLTVSESCSCQQCLKDKFSGTSCLMFFLQALGD
IPLEKTSYFLADIIYPVLLETVIKGDPRICSANIVWVSPETTTWIRNSARTRRGELAVDI
VLEKSVVKQSGDAWRILMDSCLPVLHLIDTTRSVPYAIKQVQELLGVSCAFDQAVQRLST
SVTMVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKALSRSLKFQAPFTDATLFTPKNCF
ERAAEKCHVDSLKSIVASCSWGKHVAVGTGSRFDILWNTRKCLFQDEANQKDVIDVYDFL
HMLRGAINGDELINSCLGEEIDDLMGDEAADWSLSPEHNSGNDKPSFEDMTEQELSDNDK
GGPWGSGSGAWESKAVSKTDIAGWGNEAAHDSSTSDSISWEKGGAKKPMDPPEQELGDAD
KAEPWGGRSRAWESKSMPKTDESSDWTSWGGKEVEKQNEDLPEQELGYTNKAEPLVSGSG
AWESMSMHKADEAGDWNSWGQKGAEKQKDAPPEEELGNTDNVEQWGHGSGAWESTSARRS
DEASWGNEEGHDSASGKTEDWGARIVIDGECRKSSAWDEVVNQDQSTSLWNSDGSNWKNK
SRPLKSDRIMKDNPGISGLFTATRQRLDMFTSDEEKILSDIEPLMQSIRRIIHQSGYNDG
DPLSADDQSYVLKNVFEYHPDKAVKMGTGIDFLMVSKHISFQESRCFYIVSTDGNKQDFS
YRKSLDNFIRGKYPDLAEEFIAKYFRKPHGGGNRERNVQKETGN
NT seq 4995 nt   +upstreamnt  +downstreamnt
atggaagaaagtacttcatcttctcttttggaaggggcgataacaggaatcaaatttggt
ttggcaacacggcaggaaatatgtacagcatcaatcagtgactgccctatcagccactct
agtcaattatcgaaccccttcctcgggttgccccttgaatttggtaaatgtgagtcttgt
ggcacttctgaaccaggaaaatgtgaaggtcattttgggtatatcgaattacccataccc
atatatcatcctagtcatatcagtgaactaaagaagatgttgagcttgttgtgcttgaag
tgcttaaagatcagaaacaataagataaagagtgatagcattagtggaaaattgctatct
tcatgctgcgaggatgctccacaaatttccatctgtgaagtcaaaacgacagatggttct
tatttggaactgaagttaccgtctaagtcgagattaaaggatggattctggaatttcttg
gagaaatacggtttccgctatggtgacaacatcactcgggcattgcttccttgtgaggtg
atggaaattcttaaaagaattccagaggaaagtcgaaaaaaactagtggcgaaggagttt
ttccctcaagagggatatgtcatgcaatacttgcctgtccctccaaattgtttatctttg
ccagaggtgactgacggtgctatagtgacggcttcggatccatctatatcaatgctgaag
aaagtcttgaagcaagttgaaatgataaaaagttcgcggtctggtacgccaaactttgcg
tcacatgaggttgaagctcatgatttgcaatcagctgttaatcaatatcttcaagtgcgg
ggcacagtgaagacatcacgagatctggatacaagatttgggattaacaaagaatcggat
aattcttcaaccaaggcctggctggaaaaaatgagaacgttgttcattagaaagggttct
gggttttcctcccgtagtgtgattactggtgatgcatataagggtgttaatgagattggt
ataccatcggagattgcacagaggattacttttgaagaaagagtgaatgagcacaatgtt
aagtacttgcaagagatggtggacaataatttgtgcctaacatacagggatgggtcatcc
agttattcattgcgggaaggctctaaggggcacacatttcttaggccaggtcaagtcgtg
catcggcggattatggatggtgactatgtgtttattaataggccgcccacgactcataag
cactcccttctagcactcagagtttatgtacatgatgatcacactgtaaagattaaccct
ctcatttgtgggcctctgagtgcggattttgatggagattgtgtgcaccttttctatccc
cagtctcttgctgcaaaagctgaagttctggagctttttgcggtggacaagcagttgctc
agttcccacaatggcaagcttaacttgcaactggctacagatgcacttttatcgcttaaa
ttgatgtttaagaaatatgtttttgacaaagctgctgcccaacaactggctatgtttgtt
ccaaatgtcttgccacaacctgctttgttcaaaggttatagttctgggcctctttggacg
gttatgcagattctgcaatcggctatgccttcatgtttcgactgttatggttttgatctc
agccaggaggctgtgcaacctttgttaaatgaactcgtgacctccattttcattgagaag
ggtccaaaggctgtcttggatttttttgactcgctacagcccttgttgatggagggtttg
catgctgaaggctttagtattggtttggaagaatttgtaatgtcaagggaggctgtaggc
gtagagcaattggactcatctgtttggggtgatttaattgacctcaagagcatttcagca
gtcaacaaggtagtgcagcaaattgggttacttggtcttcagatttcggacaagggaaaa
ctttattctaagacattggcggaggacatggcctctctttttgaaagaaagtgtcattct
gatggagaccagtctgcaaagaatgggtttatcaagagctgtttcttccatggactaaat
ccatttgaagagatgatgcattcaatttcaacgagagaagttatagttcgctccaccaaa
ggattatctgagccaggaaccttatttaaaaacctgatggctatccttcgggatgttgtc
atctgttatgatggcactgtaagaaatgtttgcagcaattccattatccaatttgagtat
ggggtgaatctgggaaccaagtcacagagtttattccctgctggcgaacctgttggtgtg
ctggctgcgactgcaatgtcaaatcctgcttacaaggctgttcttgattctactccaagt
agcaattcctcatgggaattaatgaaggaaatactgctttgtaaagtcggttttaagaat
gatgttattgaccggcgcataattttgtacttaaatgagtgtcgttgtgggaagaaatac
tgccgagaaagagcagtttacttggtcaagaatcatctgaataaagtcagcctcaaagat
attgctgttgacttcttgattgagagccagcagatatctgaaagtgttgatgctgatgct
ttccttgttggtcatgttcatctcaacaagaagctgttaaaagagatgaacattaatatg
tctgaggttcttcagaagtgccaagatactgccaatttataccaccggaagaagaaagtt
ggtcagctatttaaaaagacagttctcactgtcagtgaatcatgctcttgccagcaatgc
ctcaaagataagttctctggtacatcatgtttgatgttcttcttgcaagctttaggggac
atccctttggagaaaacatcgtacttccttgctgatatcatttacccggttctgttggaa
acagttatcaaaggcgaccctcggatttgctccgcaaatatagtttgggtcagtccagaa
acaacaacttggataagaaattctgctaggacacgacggggtgaattagcggtggatatt
gttcttgagaaatccgttgttaagcaaagtggtgatgcttggaggatactcatggattca
tgtctccctgttcttcatttaattgacaccactcgctcagtcccatatgcaataaagcaa
gtacaagaattgcttggggtttcatgtgcatttgatcaagcagttcagcgcctttccaca
tctgtgacaatggtagccaaaggtgttctcaaagagcatctaatcctcttagcaaacagc
atgacttgtgcaggaaatttggttggcttcaattctggtggttataaggcactttcgcgc
tccttgaagttccaagcaccatttactgatgctacactgtttacaccaaaaaattgcttt
gagagagctgctgagaagtgccatgtcgattccctaaaaagcattgttgcatcttgttct
tggggtaaacatgtggcagttggtacaggatctcgatttgatatcctctggaacacaaga
aagtgtcttttccaggacgaagcgaaccaaaaagatgtcattgatgtttatgacttcctt
cacatgttgagaggcgccataaatggagatgagttaattaattcatgtctaggtgaagaa
attgatgatctgatgggggatgaagctgctgattggagcctttctccagagcataattct
ggtaacgataaaccctcttttgaggacatgactgaacaagaattaagtgataatgataaa
ggaggaccgtggggtagtggatccggtgcttgggaatctaaggctgtgagcaaaactgat
atagctggttgggggaacgaagcagctcatgattcttctacaagtgactcgatcagttgg
gaaaaggggggagccaaaaaaccaatggaccctcctgaacaagaattgggtgatgctgac
aaagcagaaccttggggtggtagatctagggcctgggaatcaaagagtatgcctaaaact
gatgagtccagtgactggaccagttggggaggaaaggaagttgaaaaacaaaatgaagat
ctccctgaacaagaattaggttataccaacaaagcagagccattggtcagtggatctgga
gcctgggaatctatgagtatgcataaagctgatgaagccggtgactggaacagttgggga
caaaagggagctgaaaaacaaaaggacgccccccctgaagaagaattaggcaatactgac
aacgtagagcagtggggtcatggatctggtgcctgggaatctacaagtgcgcgcagaagt
gatgaagccagttgggggaatgaagaaggtcatgattctgcttcaggaaaaactgaagac
tggggtgccagaattgtgattgatggtgaatgtagaaaatcatctgcctgggatgaggtg
gtaaatcaggatcagtcaacatctctttggaattcagatggtagtaactggaaaaacaag
agccggccactgaaatctgacaggattatgaaagacaatccaggcattagtggattattt
actgctacgagacaacggcttgatatgttcacttctgatgaggaaaaaatcctttcagat
attgagccacttatgcagtcaatcagaagaataattcaccaatctgggtacaatgacggc
gatccactttcagctgatgatcagtcctatgtacttaaaaatgtgttcgagtaccaccca
gataaagctgtgaagatgggcactggcattgattttctcatggtcagcaagcacatcagt
ttccaggagagcaggtgcttttacatcgtctccactgatggtaacaagcaggacttttcc
tatcgtaaatctcttgacaattttataagggggaagtatcctgacttggccgaagaattc
attgctaagtatttcagaaaacctcatggtggagggaacagagagcggaatgttcagaag
gaaactggaaactag

DBGET integrated database retrieval system