Tripterygium wilfordii (thunder duke vine): 119990064
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Entry
119990064 CDS
T07256
Name
(RefSeq) uncharacterized protein LOC119990064
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119990064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119990064
03019 Messenger RNA biogenesis [BR:
twl03019
]
119990064
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119990064
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119990064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
119990064
NCBI-ProteinID:
XP_038691808
LinkDB
All DBs
Position
21:16752812..16756964
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AA seq
580 aa
AA seq
DB search
MQPRFNAFPHLPNQLQNNSTISPQGFSPNISMANSFNMIPNSMPLQPQLGIVNPQISMPL
NNSNTPLGNGMGMPQLGFGLQNPMHNLSAVPMFMNQVNPSQPPVQMFANNFSSMRPQQLN
LGLPNGQFCVQNMNHILPMQMSNPPQVVTQQLNQNMGHQNPAFYGNRPFGLVHTNQVGQQ
VNQHQQNLVMPMAGMNANPSSQVGSSSVRQQQTQNFRPPVSMGSQGNPVNMGRNYTSNPN
GKSFPGKNFSRNPKQEGHQGRFQKSQSHQVHSAKRKFGFSNEQKGTGRNAKRDAKFVLTN
SMNQARENKRSLALNYTEQEIGQWLAERRKNYPSKVNVEKKLTRKVMDSEIIDREVQLRR
EQLKEILAKQAELGVEVAEIPAHYLVGSENKGDERGENRPPLPKRGKFQNKHDKRGKFNK
RGHFNKKQKFAGKDSSNNSSLHKSKPTLLQKLLSADIRRDKRQLLQVFRFLEMNSFFENS
PGKPLRFPSVIIRETGFEVDVGEGISSLASKDVSGGSSEAIAENFDGANDDDDVDDGADS
DVVEDEDDDEDLARTGQADDIVNGTGDDTNKPDEEGEIIY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctcgcttcaatgccttccctcaccttcccaatcagttgcagaacaactctacg
atctctccacagggtttttctcctaatatttccatggcaaattctttcaatatgatacca
aactccatgccattgcaacctcaattgggtattgtcaacccccagatttcaatgccacta
aataattccaatacacctttgggaaatggcatgggtatgccccaattgggctttggtctg
cagaaccctatgcacaacttgagtgctgtacccatgtttatgaatcaagtcaatccaagt
cagccaccagtgcagatgtttgctaacaatttctcaagtatgaggcctcaacagctgaat
ctgggattgcctaatgggcagttctgtgtgcagaatatgaaccatattttacctatgcaa
atgtcgaatcctcctcaagttgttactcagcaacttaatcaaaacatgggtcatcaaaat
cctgccttttatggcaatcgtccatttggtttagtgcataccaatcaggttggacagcaa
gttaaccaacatcagcaaaacttggttatgcccatggcaggtatgaatgcaaacccatct
tcacaagtgggctctagttcagttcgacagcagcaaactcagaacttcagacctcctgtt
tctatgggctcccaggggaatcctgtgaacatgggccggaactatacttcaaatcccaac
gggaaatcctttccaggcaaaaacttctcaagaaatccaaaacaagagggacatcaagga
aggtttcaaaagtctcaatcccatcaagtgcatagtgcaaagaggaaatttgggttttct
aatgagcagaaaggaacaggtcgaaatgccaagagggatgcaaaatttgttttaaccaat
tctatgaatcaagctagggaaaataaaagatctctagcgttgaactataccgagcaagaa
attggacaatggcttgcagaacgtaggaagaactacccgtcaaaagtgaatgtagagaag
aaactgaccagaaaggtaatggactctgagatcattgacagagaggttcagttacgacgt
gagcaactcaaggagattttagcaaagcaggccgagttgggagttgaagttgcagaaata
cctgcacactatctggtgggctcggaaaataaaggggatgaaaggggtgagaacagaccg
ccattgcctaagaggggtaaatttcaaaacaagcatgataaaagagggaagtttaataag
agaggtcacttcaacaagaagcagaagtttgcaggaaaagattcatctaataactcctca
ttacacaaaagcaagccaactcttctgcagaagcttttgagtgcagatataaggagagac
aaaaggcagttgttacaggttttccgtttcctggagatgaattcattttttgagaattct
ccggggaagcctttgagatttccttcagtaattattagagaaactggttttgaggttgat
gtaggtgaaggaatttcctctcttgcaagcaaagatgtctctggaggcagcagcgaagca
atagctgaaaactttgatggtgcgaatgatgatgatgatgtggatgatggcgctgacagt
gacgttgttgaagatgaagatgatgatgaagacttggcacggacaggtcaagcggatgat
attgtcaatggcactggggatgataccaataaacctgacgaagagggtgaaatcatctac
tag
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