Tripterygium wilfordii (thunder duke vine): 119990144
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Entry
119990144 CDS
T07256
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119990144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119990144
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119990144
mRNA cycle factors
Common to processing body (P body) and stress granule
119990144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
119990144
NCBI-ProteinID:
XP_038691918
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All DBs
Position
3:complement(9438299..9444671)
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AA seq
975 aa
AA seq
DB search
MTTKMDNSADLSSRERAQRLYNKNVELESKRRRSAQSKIPSDPNAWQQMRENYEAIILED
HAFAEQHEIEYVLWQLHYRRIEELRGHFNAALAPTGSATSQGGKVSARPERVAKIRSQFK
NFLSEATGFYHDLMLKIRSKYGLPLGYFSDGPETQIVLSKDGNKSAETKKGLVSCHRCLI
YLGDLSRYKGLYGEGDSKTRDFAAASTYYMQACSLWPSSGNPHHQLAIVASYSGDELLAI
YRYFRSLAVDNPFSTARDNLIVAFEKNRQSFSQLVGDANGTSVKSAPMQMNVKERGKVGT
TTLNDSKMEASSVKQNSSCTPEDFKAFSIRFVRLNGILFTRTSLETFGEVFSMVRGDLIE
LLSSGPEENYKFGSGAADVGVLIVRLIAIVIFTVHNVNREVENQSYADILQRSVLLKNAF
TFVFEFTGLIVKRCLQLHDASGSSLLPGVLIFMDWLACHPDFAAGSEVDEKQAAARSFFW
NNCIILMNKLLSNTAISIEEDKDETCFFNMSRYDESETSNRLALWEDFELRGFVPLAPAQ
SILDFSRKQSLGSDGSGKAKRARLQRIISAGKALISVVRVGQQSMYFDSRGKKFSVGVEP
EIADYELIDSFEAPVSNGLAEEHSGKQKVGLGLLQSKSQLHMDGEEEDEVIVFKPTVSDK
QADCVGLLHSEIHGSSSNASQSDIGSSVGTISAPHNGSFMMNAFDTNGWPTASLSTIPLP
LKPIQPSTSKWQRESEVSVANGLNNLNLLENGLVVKHRLQEYVGVMQPAIDSLPLPLSMD
LISRHAFSGQVSDSIIPSKLDSVMPSEQSFDGLHVKSSSALPVVARKNPVGRPARRVGPP
PGFSHVPPKPVNESLSGIVDGNMRMDDYSWLDGYQLPSSTKGMGFTNTTNHTAQSYLHAN
VTNSMGSSFPFPGKQVPTMQPQMENHRIQQEYRVPDHLKLYHELQQQQLGKPMQQPMPLP
EQFKGVPPREGRFFV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaagatggacaattcagctgatctttcatcaagagagcgtgctcaacgcctt
tacaacaagaatgttgagttggagagtaagcgtcgaaggtcggcccagtccaaaattcca
tcagatcctaatgcctggcaacagatgcgagaaaattatgaagcaattatccttgaagat
catgcttttgctgaacaacatgaaatagagtatgttttgtggcagttgcattaccgccgg
attgaggagctacgaggacacttcaatgctgctcttgctccaactggttcagccacatct
cagggcgggaaagtttccgcacgacctgagcgagttgctaaaattcgttcccagtttaag
aactttctttctgaagctacaggattttatcatgatcttatgctcaaaatcagatcaaag
tatggtttacctctgggatatttctctgatggtccagagactcagattgttctctctaaa
gatggaaataaatctgccgagacaaagaaagggctcgtttcttgtcaccgttgtctaatt
tacttgggtgatctttcgcgttataaaggtttatatggggaaggtgattcaaagactaga
gattttgcagcggcatcaacttactatatgcaagcttgctcactttggccttcaagtggc
aatcctcatcaccagcttgcgatagtggcttcctactctggggatgaattgttggcaata
tatcgctacttccggagtctggcagttgataacccattttcaactgctagagataactta
atagtcgcatttgaaaagaatcgtcagagcttttcccaacttgtgggtgatgccaatggt
acatcagtaaagagtgcaccaatgcaaatgaatgtgaaagaaagaggaaaagttggaaca
acaaccttgaacgatagtaaaatggaagctagttctgtgaagcaaaattcgtcttgtaca
cctgaagattttaaagctttcagcattcgatttgtgcgactaaatggcatcctctttaca
cgcacaagcttggagacttttggagaagtgttctctatggttagaggtgatttgattgag
cttctctcgtcggggcctgaagaaaactacaaatttggttcaggtgctgcagacgttgga
gttctcattgttaggctcatagccattgtcatattcacagtgcataacgtgaatcgagaa
gttgagaatcaatcctacgctgacattttacaacgatcggttctacttaagaatgctttt
actttcgtctttgagtttacggggctcatcgtcaagagatgtctacaactgcatgatgct
tctggaagctctctattgcctggtgtgctgatatttatggactggttagcatgtcatcca
gattttgcagctggaagtgaagtagatgaaaagcaagctgctgcacgatcatttttttgg
aacaactgtatcatactaatgaataaactcttgtccaatacagccatttcaattgaggag
gacaaagatgaaacatgttttttcaacatgagcagatatgatgagagtgaaacttcgaat
cggcttgcattatgggaggactttgaattaagaggattcgttccccttgctcctgcgcaa
tcaattcttgatttttcgaggaagcaatcccttggaagtgatggtagtggaaaggcaaag
agagctcgtcttcagaggattatatcagctggaaaggctcttataagcgttgttcgggtt
gggcagcaaagcatgtactttgattcaagggggaagaaattttctgttggtgttgagcct
gaaatagctgattatgagctgattgattcttttgaagctcctgtttcaaatggtttggca
gaagaacattcaggtaagcagaaagtgggattgggacttttacagtcgaagtcgcagtta
cacatggatggagaagaagaggacgaggtcattgttttcaaacccactgtgagtgataag
caagctgattgcgttggcttgttgcattctgagattcacggaagttcttctaatgcttca
cagagtgatattggaagttctgttggtaccatttcagccccccataatggtagtttcatg
atgaatgcttttgatacaaacgggtggccaacggcatctctttctactattccattgcct
ttgaaaccaatccaacctagcacttcaaagtggcagagggagtctgaagtttctgttgca
aatgggttaaacaatttgaatttgttggagaatgggcttgtcgtgaagcataggttgcaa
gaatatgttggagttatgcagcctgctatagattctcttcctctcccgctctctatggat
ctcatttctcgccatgcgttttctggtcaagtttctgattctataataccttctaaactt
gattctgtcatgccttcagaacaaagttttgatggtctgcatgtgaagtcgtcatcagcc
ttgccagtagttgccagaaagaatcctgtgggccgtccagctcgtcgtgttggtcctcca
cctggatttagccatgttcccccaaaacctgtaaatgagtccctgtctggtattgtggat
ggtaatatgcggatggatgattatagctggctagatggatatcaactgccatcatcaaca
aaaggcatggggtttacaaatactaccaatcacacagctcaatcataccttcatgctaat
gtgaccaacagcatggggtcaagctttccgttccctggaaaacaagtcccaacaatgcaa
cctcaaatggaaaaccatagaattcagcaggagtaccgggttcctgatcatctgaagcta
taccatgagctgcagcaacaacaacttggcaaaccaatgcagcaacctatgccgctgcca
gagcagtttaagggagttcctcctcgggaaggtcgtttctttgtgtga
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