Tripterygium wilfordii (thunder duke vine): 119990413
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Entry
119990413 CDS
T07256
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119990413
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
twl01002
]
119990413
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119990413
03036 Chromosome and associated proteins [BR:
twl03036
]
119990413
03400 DNA repair and recombination proteins [BR:
twl03400
]
119990413
Peptidases and inhibitors [BR:
twl01002
]
Metallo peptidases
Family M67
119990413
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119990413
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
119990413
BRISC complex
119990413
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
119990413
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119990413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
119990413
NCBI-ProteinID:
XP_038692234
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Position
22:3956473..3962525
Genome browser
AA seq
436 aa
AA seq
DB search
MSLTCVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGNVTALIWGAAPQSRSDRR
KDRVETNPEQLAAASAQAERMTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIYSCFSEDVNKVGRIQVIAFQSSDGNHSSMPRPISLSPINGSIIDVESSLSSSE
NTPTRSRSAKAESPELDTSNSGIAGGTSKDGGKSSNLGGFFANADANYVGREKTGGDYHT
DNLDSAVVDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLESPLKSF
ADLQHVLYEEERAAYNQAILANMRDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
ERLKENEIRLAMLIDEAKILETEAFRGTESPNLSPRHGTSHGVRGSPVGHRDSRSSAEPA
NLRTVSGSGSRSRKMF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacatgtgtaaagatgtctgaggatgtgtggttaacgtgtcttacccatgca
ttgtccactgaaactgaggagatcatggggcttcttcttggtgatattgagtactcaaaa
aatgggaatgtcacggcgctaatctggggtgcagcaccccagtctcgatctgacagaagg
aaggaccgagtagagacaaatcctgaacaattggctgctgcgtctgctcaggctgaaaga
atgactgcatcaacgggaagaacaacaagagtgattggatggtaccattcacatcctcat
attacagttctaccctctcatgttgatgtgcggactcaggcaatgtatcaacttctagat
tctgggtttattgggctaatatattcctgtttcagtgaagatgtaaataaggttggcaga
atccaagttatcgcgttccagtcctcagatgggaatcatagttccatgccaagacctatt
tctctatcacctataaatggttcaattattgatgttgaatcatctttaagttcctcagaa
aatacaccaacaagatccagatctgcaaaggcggagagcccagagctggacaccagtaat
tcaggaatagctggaggaactagtaaggatggaggaaaatcttcaaatttggggggcttc
tttgctaatgctgatgccaattatgttggaagagaaaaaaccggtggagattatcacact
gacaatttagatagtgctgttgttgatattgaccccatggatatgtcagaaagtatgcaa
gaagctatgcaccgttcaaatttggacatgagtggtgctgaatatgttcgaaaagagata
cctcttcatgttttgccaacctcatctctgcttaagctcgagtcacccctaaagtcattt
gcggatttgcaacatgttctatatgaggaggagcgagcagcatataaccaagccatcctg
gcaaatatgagggatggaaaagtgcatccccttactttcattcatcacacatcgacatat
caggcttccatgtgcaaattaattgaatattgtctgagtccggccattagtgcactgcag
gaacgcttgaaagagaatgaaattcggctagcgatgctgattgatgaagccaagattttg
gagaccgaggcttttagggggacagagtcacctaatttatctccacgtcatggtacttct
catggagttagaggaagccctgtgggtcacagggactcccgtagttcagctgagcctgcc
aatttgaggaccgtgtctggttctggtagccgaagcagaaaaatgttttga
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