Tripterygium wilfordii (thunder duke vine): 119990757
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Entry
119990757 CDS
T07256
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119990757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119990757
04121 Ubiquitin system [BR:
twl04121
]
119990757
03036 Chromosome and associated proteins [BR:
twl03036
]
119990757
03400 DNA repair and recombination proteins [BR:
twl03400
]
119990757
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119990757
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119990757
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119990757
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119990757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-HC5HC2H_2
zf-C3HC4_4
zf-RING_6
zf-C3HC4
zf-RING_UBOX
PHD_NSD
zf-RING_2
zf-C3HC4_3
zf-RING_5
RTT107_BRCT_5
zf-RING_10
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119990757
NCBI-ProteinID:
XP_038692769
LinkDB
All DBs
Position
22:4598873..4604766
Genome browser
AA seq
698 aa
AA seq
DB search
MAEGTARQARRSMKPWVLLHLQKLGLELKCPLCLDFLTRPTMLPCNHIFCNPCMPKSTQF
GAECFVCKARYCDKDLRFMPFMENIVAIYRSLDAGFGDSFSDPASSDSGGVLVQCRASMS
EGVQNQLSNRSIKTTRENNSRMGHSVFPPNVGEEDEAVGANGHQYDEKLLISEAREKGIE
GCRNSHIGADQAVQSSLDSPPISKGSDNDSNDHASYHSSKHCPVARSVKRKDTRRLERHG
SSASETEGCLFMDAKRSKKLKYGPVDAGKESADNVGTVLPKMGGSNLSNSGLEPKSVESL
AGMNDSCTDKNSCGFCQSSKISQGTGPMLHFANGKQVVGDEATYSIVIHVHKVCIDWAPQ
VYYDGDIVKNLKSELARGAKLKCSGCGLKGAALGCYVKSCRRSYHVPCALKIPKCRWDLD
NYVVLCPAHSSAKLPNEKSSNSGTCNQTSHFVPAQITPQEASFWKDSHTGAKDWVLCGSA
LSSAEKLLLIRFASMIGVTVSKFWRPDVSHVIAATDKTGACTRTLKVLMAICNGRWVLSI
DWVKACMERMYAMNEEPYEVSLDNYGCCNGPKTGRLNAVNGVPKLFNGLSFYFSGEFVPA
YKEDIQKLVIAAGGSVCESEEELTVQKHDKQAASSKQLVVYNLDPPQGSKVGEEISYMWE
RLSEAENLASKMGSEVVGHTWILESIAAYKLQPVCQLT
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcacggcgaggcaggcacggagatcgatgaaaccctgggttctcctccat
ctccagaaactcggtctcgagctcaaatgccctctctgcttggacttcctaactcggccg
actatgcttccttgtaatcacatattctgcaacccatgcatgcccaagtctactcaattt
ggcgcagagtgtttcgtctgcaaagctcgatactgtgataaagatctaagatttatgccc
ttcatggaaaacattgtggcaatctataggagtttggatgcgggtttcggggacagtttc
tcagaccctgcatcttctgattctggtggagttttggtgcaatgtcgggcttcaatgagt
gagggtgtccaaaatcaattaagtaacagatcaattaagaccacaagggagaataattca
agaatggggcactctgtgtttccccctaatgtgggtgaagaagatgaagcagtgggtgcc
aatggtcatcagtatgatgagaaactgctaatttctgaagcaagagaaaaggggattgaa
gggtgcagaaatagccatataggagcagatcaggcagtacaatcatcactggatagccct
ccgattagtaaaggctcagacaatgacagtaatgatcatgccagttatcatagttcaaag
cattgccctgtcgcacgatcagtgaagagaaaggatacaagaagactagagaggcatggg
agttctgcctctgaaactgaaggttgtctgttcatggatgctaaacgatctaagaagttg
aagtatggtccagtagatgcaggtaaggagagtgcagataatgttggaacagttcttccc
aaaatgggaggttcaaacctctcaaactctggattggaacccaaatctgttgaatctctt
gctggtatgaatgattcatgtacagataaaaacagttgtggattttgccagtcctcaaaa
atctcacagggtactggcccaatgttgcattttgctaatggaaagcaggtagtgggagat
gaggccacctattcaattgttatacatgttcacaaagtatgcattgattgggcgccccaa
gtgtactatgatggggatattgtaaaaaatttgaagtcagagttggctaggggtgcaaag
cttaaatgcagcggatgtgggttaaagggagcagcactaggttgctatgtgaaatcatgc
agaagaagttatcatgttccttgcgctttgaaaataccaaaatgtcggtgggatcttgat
aactatgttgtactctgtccagctcattcttcggcgaaactgccaaatgaaaagtcatcc
aactctgggacttgcaaccaaacaagtcattttgtgccagctcaaataacccctcaggaa
gctagcttttggaaagactcacatactggagcaaaagactgggttttgtgcggatctgct
ctttcttcagcggagaagcttcttttgattaggtttgccagcatgatcggtgtaactgtg
tccaaattctggagaccagatgtatcacatgtgattgctgcaactgataaaacaggtgca
tgcaccaggacactgaaagttctcatggcaatttgcaatgggagatgggttcttagtatt
gactgggtaaaagcatgcatggaacgtatgtatgctatgaatgaagaaccttacgaagtt
agccttgacaactatggttgctgcaatggccccaagactggcagacttaatgcagtgaat
ggtgtgccaaaacttttcaatggcttaagtttttatttctctggtgaattcgtgcctgct
tacaaggaagatatccaaaaattagttattgccgcgggtggttctgtttgtgagagtgag
gaagaattgacggtgcaaaagcacgacaagcaggcagcttcttcaaaacaactggttgtt
tacaaccttgatcccccacaaggaagcaaggttggggaagaaatatcctatatgtgggaa
agactgagtgaagcagagaatttagcttctaaaatgggatctgaagtggtaggtcatact
tggattttggagtcaattgctgcctataaattgcagccagtttgtcagcttacatag
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