Tripterygium wilfordii (thunder duke vine): 119990801
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Entry
119990801 CDS
T07256
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119990801
Enzymes [BR:
twl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119990801
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119990801
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Toxin_20
Motif
Other DBs
NCBI-GeneID:
119990801
NCBI-ProteinID:
XP_038692876
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Position
1:10520945..10525821
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AA seq
610 aa
AA seq
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MKIVTYNVNGLRQRISQFGSLLKLLDSFDADIICFQETKLRRQELTTDVVMADGYESFFS
CTRTNDKGRTGYSGVATFCRVKSAFSSNEVALPIAAEEGFTGLLENGEGGKDGAVAEGLE
EFTNDELLKVDREGRCVITDHSHFGDYYWSFLNLCYSIYTGLEQDVMMLRGHSLSVIFSI
YYRWESILHRGRRVFVVGDLNIAPAAIDRCDAESDFEKNEFRRWFRSILVESGGPFFDVF
RVKHPDRKDAYTCWPSSTGAEQFNYGSRIDHILCAGSCLHQDNDPGGHKFVTCHVKECDI
LTEYKRWKPGNTTRWKGGWSIKLEGSDHAPVYMNLVEISVILRHSTPSLSARYLTGIRGL
QQTLVSVLMKRQVATQFQSFRATNSVPYGNSGTPTSETSSSLSQDPQGGFSNTDEHSRES
VDEDGNKARITLRSKHYSSVPTENSRKKVRRGQQSQLSVRAFFQKSSSLKTTNDSSGTDI
SYEQAVVKNCSNQSHETPVSAEADESNCFKHCGSGSNSLTQDEDEEHCGSLEKEKNSTAL
QEWQRIQQLMKSSIPLCKGHKEPCVARVVKKPGPTFGRRFYVCARAEGPSSNPEANCGYF
KWASSKSRPK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacgtacaacgtgaatggtctgaggcaacgaatctcccagtttggttct
ctcctcaaactactcgattccttcgatgccgatattatatgcttccaggaaaccaaatta
cgaagacaggagctgacaacggatgtggtcatggctgatgggtatgaatcgtttttctcc
tgcacgcgaacaaatgataaaggccggactggctattcaggggtagcaacgttttgccgt
gtaaagtcggccttttcaagtaacgaagtggcattgccgattgctgcagaggaaggcttc
actggccttttagagaatggtgagggcggaaaagatggtgcagttgctgaagggcttgag
gagttcacaaatgatgaacttcttaaagttgacagggagggacgatgtgttatcactgat
cacagccactttggtgattattactggtcatttctaaatttgtgctattcaatatatacg
ggcctagagcaggatgtgatgatgctgagaggacacagtttaagcgtgattttttcaata
tactacaggtgggaatctatcttgcatcggggaagaagggtttttgttgttggagatctg
aacattgctccagctgctatagaccgctgtgatgcagaatcagattttgagaagaatgag
ttcagaagatggtttagatctatcctggtggaatccggtggcccattctttgatgttttc
agagtaaaacatcctgacaggaaggatgcatacacatgctggccatcaagtaccggtgct
gaacaattcaattacgggtcaagaattgaccatattctttgtgccggatcttgcttgcat
caagataacgacccaggagggcataagttcgtaacttgccatgttaaggaatgtgatatt
ttgacagagtataaacgctggaaacccggtaatacaactaggtggaaaggaggttggagc
attaagctggaaggttcagaccacgctcctgtgtatatgaatttggtagaaatctctgtt
atcctccggcatagcactccttctttatctgctagatatcttacggggattcgtgggctt
caacaaacgctagtctctgtgttaatgaagagacaagttgcgactcaattccaatccttc
agggccacaaattcagttccgtatggaaatagtggcacaccaacaagtgaaacttcttcg
tctttgagccaagatccccaaggtggattctcgaatacagatgagcattcccgagaatct
gttgacgaggatggcaataaagccagaatcacattgcggagtaagcattatagttcagtg
ccaactgaaaatagcaggaaaaaagtgagaagaggccagcaatcacaactttctgtgagg
gcatttttccagaaaagttcaagtcttaagactactaacgacagctctggaactgatatc
tcatatgagcaggcagtggtaaaaaattgtagtaaccaatctcatgaaactcctgtctcg
gcagaagctgatgaaagcaattgtttcaagcactgtggatctggttcgaattcattgacc
caggatgaggatgaagaacattgcggttctttagagaaagagaaaaatagcacagcttta
caggaatggcaaaggatacagcaactgatgaagagtagcatacctctttgcaagggccat
aaggaaccgtgtgttgctcgagtagtgaagaaacctggtcctacttttggtcgcagattt
tacgtctgcgctcgagctgagggtccttcctcaaatcctgaagcaaactgcggttacttt
aaatgggcttcttcaaaatctcggcccaaatga
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