Tripterygium wilfordii (thunder duke vine): 119990911
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Entry
119990911 CDS
T07256
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119990911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119990911
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119990911
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
119990911
NCBI-ProteinID:
XP_038692978
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Position
22:812493..817716
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AA seq
377 aa
AA seq
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MVNSFIVLVIKSQESMASKPFSFDFLNGIWADGSSSSFFSVEPIGPRQETFSLPEMVKAL
QNPDTRDRALHLLATKIRGHDEMKFICKDARKDQLALLLWKTPGIIFVLLQEVIDTYRVL
STSQLTDNVTTRVCNALSLLQKVASHPETTLQFMKASIPQYLYPFLNITETDRAHEYLRL
TSLGVIGSMLKVCSSSSSLLVLKWISFIKKIKDLWINPQDDSNDEAVVFLLSSEVFPYVL
RCMNVGAELSKTVAVYIIHRILLNREGVRYCCTVGERYYAVAKTLANMVDEIPVHVSCKR
LLKHIVSCYVTLSENARSCDGLVTCFPRRLVDGSFYHLLNDDPAVKVYLQKLLHTIHGGS
RAKIQLAEEALGRFIGS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattcgtttattgttttggtgatcaagagtcaagagagtatggcgagcaaacca
ttctcttttgatttcttgaatggaatttgggcagatggttccagctcgagcttcttcagt
gttgaaccaattggtccgcgacaagagactttttctttgccggagatggttaaggccctc
cagaatcctgacacccgagaccgtgctcttcacctccttgcaacgaaaataagagggcat
gatgaaatgaaatttatttgtaaggatgctcgcaaagatcagttggcactgttattgtgg
aaaactcccggtattatctttgtactcttgcaggaagtaattgatacatatcgcgtgctt
tcaacttcacagctaactgataatgtaaccactcgagtctgcaatgctctttctttgctt
cagaaggtagcttcccacccagaaacaactctgcagtttatgaaggctagtataccgcaa
tatctctaccccttcctcaacatcacggagacggatcgggctcatgaatacctaaggctt
accagtttgggcgttatcggttccatgctgaaggtctgtagttcctccagttctctatta
gttctaaaatggattagctttatcaaaaaaatcaaagatttatggattaatccacaggat
gacagcaacgacgaagctgtagtattccttctcagtagtgaagtattcccttatgtcctt
cgttgcatgaacgtgggcgctgaattgtccaaaacagttgcggtgtatataattcacagg
attttactgaatagggagggggtgagatattgttgcactgttggagaaaggtattatgca
gtggccaaaacattagcaaatatggttgatgaaatccctgttcacgtatcctgcaaaagg
ctgctgaagcatattgtttcctgctatgttaccctctcagaaaacgcaaggtcatgtgat
ggattagttacttgctttccaaggaggctagttgatggtagcttttatcacctcctgaat
gatgacccagcagtgaaagtttacctgcaaaaattgcttcacaccatccatggtggaagc
agggctaaaattcaactagctgaagaggcattgggtcgatttattgggagctag
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